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Cofit
Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS20015 and ABZR88_RS20020 are separated by 99 nucleotides
ABZR88_RS20020 and ABZR88_RS20025 are separated by 619 nucleotides
ABZR88_RS20025 and ABZR88_RS20030 are separated by 9 nucleotides
ABZR88_RS20030 and ABZR88_RS20035 are separated by 99 nucleotides
ABZR88_RS20015: ABZR88_RS20015 - hypothetical protein, at 4,863,451 to 4,863,789
_RS20015
ABZR88_RS20020: ABZR88_RS20020 - energy transducer TonB, at 4,863,889 to 4,864,557
_RS20020
ABZR88_RS20025: ABZR88_RS20025 - peptidoglycan DD-metalloendopeptidase family protein, at 4,865,177 to 4,865,863
_RS20025
ABZR88_RS20030: ABZR88_RS20030 - ribosome-binding factor A, at 4,865,873 to 4,866,244
_RS20030
ABZR88_RS20035: ABZR88_RS20035 - hypothetical protein, at 4,866,344 to 4,866,760
_RS20035
Group
Condition
ABZR88
_RS20015
ABZR88
_RS20020
ABZR88
_RS20025
ABZR88
_RS20030
ABZR88
_RS20035
stress
potassium fluoride stress 30 mM
N.D.
-0.2
+0.1
N.D.
-0.8
stress
potassium fluoride stress 30 mM
N.D.
-0.3
-0.0
N.D.
-0.5
no stress control
R2A no stress control
N.D.
-0.4
+0.1
N.D.
-0.5
stress
Erythromycin stress 0.05 mg/ml
N.D.
-0.4
-0.0
N.D.
-0.3
stress
copper (II) chloride stress 1 mM
N.D.
-0.2
-0.0
N.D.
-0.4
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
N.D.
-0.1
+0.0
N.D.
-0.5
motility_chemotaxis
R2A motility; outer cut
N.D.
+0.1
-0.1
N.D.
-0.4
motility_chemotaxis
R2A motility; outer cut
N.D.
+0.0
-0.2
N.D.
-0.2
stress
R2A_low_K2HPO4
N.D.
-0.0
+0.0
N.D.
-0.4
stress
R2A_high_K2HPO4
N.D.
+0.1
-0.2
N.D.
-0.3
temperature
R2A 15C; 144 hours
N.D.
+0.0
+0.4
N.D.
-0.7
carbon source
alginate (C)
N.D.
-0.2
-0.3
N.D.
+0.2
stress
Quercetin stress 0.05 mg/ml
N.D.
-0.0
+0.1
N.D.
-0.3
stress
Kanamycin sulfate stress 0.05 mg/ml
N.D.
+0.1
+0.0
N.D.
-0.4
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
N.D.
-0.3
+0.3
N.D.
-0.2
stress
R2A_low_K2HPO4
N.D.
+0.1
-0.1
N.D.
-0.2
carbon source
Melibiose (C)
N.D.
+0.1
-0.2
N.D.
+0.1
carbon source
D-Maltose (C)
N.D.
+0.1
-0.4
N.D.
+0.3
temperature
R2A 15C; 72 hours
N.D.
+0.0
+0.3
N.D.
-0.3
carbon source
alginate (C)
N.D.
-0.1
+0.3
N.D.
-0.2
stress
copper (II) chloride stress 1 mM
N.D.
+0.1
+0.2
N.D.
-0.2
motility_chemotaxis
R2A motility; outer cut
N.D.
+0.1
+0.2
N.D.
-0.2
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
N.D.
-0.0
+0.5
N.D.
-0.4
carbon source
L-Rhamnose (C)
N.D.
-0.0
-0.3
N.D.
+0.6
temperature
R2A 15C; 144 hours
N.D.
+0.4
+0.4
N.D.
-0.5
carbon source
D-Maltose (C)
N.D.
-0.1
+0.2
N.D.
+0.4
carbon source
L-Rhamnose (C)
N.D.
+0.2
-0.0
N.D.
+0.4
temperature
R2A 30C; 144 hours
N.D.
+0.4
+0.3
N.D.
-0.1
motility_chemotaxis
R2A motility; outer cut
N.D.
+0.4
-0.2
N.D.
+0.4
carbon source
Pullulan (C)
N.D.
+0.1
+0.4
N.D.
+0.1
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