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Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS19905 and ABZR88_RS19910 are separated by 204 nucleotides
ABZR88_RS19910 and ABZR88_RS19915 are separated by 170 nucleotides
ABZR88_RS19915 and ABZR88_RS19920 are separated by 30 nucleotides
ABZR88_RS19920 and ABZR88_RS19925 are separated by 101 nucleotides
ABZR88_RS19905: ABZR88_RS19905 - HD domain-containing protein, at 4,837,482 to 4,838,714
_RS19905
ABZR88_RS19910: ABZR88_RS19910 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 4,838,919 to 4,839,959
_RS19910
ABZR88_RS19915: ABZR88_RS19915 - bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase, at 4,840,130 to 4,841,524
_RS19915
ABZR88_RS19920: ABZR88_RS19920 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 4,841,555 to 4,842,337
_RS19920
ABZR88_RS19925: ABZR88_RS19925 - ATP-binding cassette domain-containing protein, at 4,842,439 to 4,843,071
_RS19925
Group
Condition
ABZR88
_RS19905
ABZR88
_RS19910
ABZR88
_RS19915
ABZR88
_RS19920
ABZR88
_RS19925
carbon source
L-Rhamnose (C)
-0.5
N.D.
N.D.
N.D.
N.D.
carbon source
L-Rhamnose (C)
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with Apigenin 50 ug/ml
+0.2
N.D.
N.D.
N.D.
N.D.
stress
Kanamycin sulfate stress 0.05 mg/ml
+0.2
N.D.
N.D.
N.D.
N.D.
temperature
R2A 30C
+0.2
N.D.
N.D.
N.D.
N.D.
no stress control
R2A no stress control
+0.2
N.D.
N.D.
N.D.
N.D.
temperature
R2A 30C
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Starch (C)
+0.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.3
N.D.
N.D.
N.D.
N.D.
stress
R2A_high_K2HPO4
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
alginate (C)
+0.3
N.D.
N.D.
N.D.
N.D.
stress
Esculin Monohydrate stress 5 mM
+0.3
N.D.
N.D.
N.D.
N.D.
stress
Quercetin stress 0.05 mg/ml
+0.3
N.D.
N.D.
N.D.
N.D.
motility_chemotaxis
R2A motility; outer cut
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
Beta-Lactose (C)
+0.4
N.D.
N.D.
N.D.
N.D.
temperature
R2A 21C
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Pullulan (C)
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Pullulan (C)
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Pullulan (C)
+0.4
N.D.
N.D.
N.D.
N.D.
temperature
R2A 15C; 72 hours
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Pullulan (C)
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Beta-Lactose (C)
+0.5
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
+0.5
N.D.
N.D.
N.D.
N.D.
stress
Erythromycin stress 0.05 mg/ml
+0.5
N.D.
N.D.
N.D.
N.D.
stress
Trimethoprim stress 0.05 mg/ml
+0.6
N.D.
N.D.
N.D.
N.D.
stress
Erythromycin stress 0.05 mg/ml
+0.6
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
+0.6
N.D.
N.D.
N.D.
N.D.
temperature
R2A 15C; 144 hours
+0.6
N.D.
N.D.
N.D.
N.D.
temperature
R2A 15C; 72 hours
+0.6
N.D.
N.D.
N.D.
N.D.
temperature
R2A 15C; 144 hours
+0.8
N.D.
N.D.
N.D.
N.D.
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