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Protein
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Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS19190 and ABZR88_RS19195 are separated by 4 nucleotides
ABZR88_RS19195 and ABZR88_RS19200 are separated by 394 nucleotides
ABZR88_RS19200 and ABZR88_RS19205 are separated by 0 nucleotides
ABZR88_RS19205 and ABZR88_RS19210 are separated by 0 nucleotides
ABZR88_RS19190: ABZR88_RS19190 - response regulator transcription factor, at 4,680,688 to 4,681,365
_RS19190
ABZR88_RS19195: ABZR88_RS19195 - HAMP domain-containing sensor histidine kinase, at 4,681,370 to 4,682,698
_RS19195
ABZR88_RS19200: ABZR88_RS19200 - lipoprotein signal peptidase, at 4,683,093 to 4,683,698
_RS19200
ABZR88_RS19205: ABZR88_RS19205 - TraR/DksA C4-type zinc finger protein, at 4,683,699 to 4,684,085
_RS19205
ABZR88_RS19210: ABZR88_RS19210 - isoleucine--tRNA ligase, at 4,684,086 to 4,687,475
_RS19210
Group
Condition
ABZR88
_RS19190
ABZR88
_RS19195
ABZR88
_RS19200
ABZR88
_RS19205
ABZR88
_RS19210
stress
Erythromycin stress 0.05 mg/ml
-1.4
-1.2
N.D.
-1.3
N.D.
carbon source
D-Xylose (C)
-1.7
-1.5
N.D.
-0.8
N.D.
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-1.9
-1.6
N.D.
-0.3
N.D.
carbon source
D-Xylose (C)
-1.5
-1.6
N.D.
-0.6
N.D.
stress
Erythromycin stress 0.05 mg/ml
-1.3
-1.3
N.D.
-0.8
N.D.
carbon source
L-Rhamnose (C)
-1.3
-0.5
N.D.
-1.5
N.D.
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-1.8
-1.4
N.D.
+0.1
N.D.
no stress control
R2A no stress control
-0.8
-1.0
N.D.
-0.8
N.D.
stress
copper (II) chloride stress 1 mM
-1.0
-0.8
N.D.
-0.8
N.D.
carbon source
L-Rhamnose (C)
-0.4
-0.5
N.D.
-1.6
N.D.
stress
potassium fluoride stress 30 mM
+0.2
+0.2
N.D.
-2.8
N.D.
stress
copper (II) chloride stress 1 mM
-0.7
-0.8
N.D.
-0.6
N.D.
motility_chemotaxis
R2A motility; outer cut
-1.3
-1.2
N.D.
+0.5
N.D.
motility_chemotaxis
R2A motility; outer cut
-1.3
-1.3
N.D.
+0.7
N.D.
stress
potassium fluoride stress 30 mM
+0.3
+0.2
N.D.
-2.3
N.D.
temperature
R2A 30C; 144 hours
-0.8
-1.2
N.D.
+0.1
N.D.
stress
R2A with Apigenin 50 ug/ml
-0.9
-0.9
N.D.
+0.3
N.D.
temperature
R2A 30C
-0.9
-0.7
N.D.
+0.6
N.D.
motility_chemotaxis
R2A motility; outer cut
-0.8
-0.7
N.D.
+0.9
N.D.
motility_chemotaxis
R2A motility; outer cut
-1.3
-1.0
N.D.
+1.7
N.D.
stress
Quercetin stress 0.05 mg/ml
-1.0
-0.7
N.D.
+1.4
N.D.
stress
Quercetin stress 0.05 mg/ml
-0.7
-0.8
N.D.
+1.2
N.D.
carbon source
Pullulan (C)
-0.8
-0.6
N.D.
+1.3
N.D.
carbon source
Pullulan (C)
-0.3
-0.4
N.D.
+1.4
N.D.
carbon source
L-Arabinose (C)
-0.5
-0.3
N.D.
+2.0
N.D.
carbon source
L-Arabinose (C)
-0.3
-0.1
N.D.
+1.9
N.D.
temperature
R2A 15C; 144 hours
-0.2
-0.3
N.D.
+2.5
N.D.
temperature
R2A 15C; 144 hours
-0.2
-0.3
N.D.
+2.5
N.D.
temperature
R2A 15C; 72 hours
-0.1
-0.2
N.D.
+2.4
N.D.
temperature
R2A 15C; 72 hours
+0.0
-0.2
N.D.
+2.5
N.D.
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