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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS19050 and ABZR88_RS19055 are separated by 7 nucleotides
ABZR88_RS19055 and ABZR88_RS19060 are separated by 13 nucleotides
ABZR88_RS19060 and ABZR88_RS19065 are separated by 234 nucleotides
ABZR88_RS19065 and ABZR88_RS19070 are separated by 13 nucleotides
ABZR88_RS19050: ABZR88_RS19050 - efflux RND transporter permease subunit, at 4,652,164 to 4,655,328
_RS19050
ABZR88_RS19055: ABZR88_RS19055 - efflux RND transporter periplasmic adaptor subunit, at 4,655,336 to 4,656,421
_RS19055
ABZR88_RS19060: ABZR88_RS19060 - MarR family winged helix-turn-helix transcriptional regulator, at 4,656,435 to 4,656,899
_RS19060
ABZR88_RS19065: ABZR88_RS19065 - 1-hydroxycarotenoid 3,4-desaturase CrtD, at 4,657,134 to 4,658,603
_RS19065
ABZR88_RS19070: ABZR88_RS19070 - hypothetical protein, at 4,658,617 to 4,658,805
_RS19070
Group
Condition
ABZR88
_RS19050
ABZR88
_RS19055
ABZR88
_RS19060
ABZR88
_RS19065
ABZR88
_RS19070
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.3
-1.1
-0.1
+0.1
N.D.
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.1
-0.3
-0.2
-0.0
N.D.
carbon source
L-Rhamnose (C)
-0.0
-0.2
-0.4
-0.1
N.D.
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
+0.0
-0.3
-0.2
-0.1
N.D.
stress
copper (II) chloride stress 1 mM
-0.4
-0.1
+0.0
-0.2
N.D.
stress
copper (II) chloride stress 1 mM
-0.2
-0.1
-0.2
-0.1
N.D.
temperature
R2A 30C; 144 hours
+0.0
-0.7
-0.1
+0.1
N.D.
temperature
R2A 15C; 72 hours
-0.1
-0.1
-0.5
+0.1
N.D.
motility_chemotaxis
R2A motility; outer cut
+0.1
-0.5
+0.1
-0.1
N.D.
motility_chemotaxis
R2A motility; outer cut
+0.1
-0.0
-0.5
+0.0
N.D.
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.2
-0.5
+0.4
-0.0
N.D.
carbon source
Beta-Lactose (C)
-0.0
+0.3
-0.6
+0.0
N.D.
carbon source
D-Maltose (C)
+0.1
-0.6
+0.3
-0.1
N.D.
carbon source
Beta-Lactose (C)
+0.0
+0.2
-0.2
-0.3
N.D.
stress
potassium fluoride stress 30 mM
-0.0
+0.2
-0.2
-0.2
N.D.
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
-0.0
+0.2
-0.4
+0.1
N.D.
motility_chemotaxis
R2A motility; outer cut
+0.0
-0.1
-0.2
+0.2
N.D.
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.1
+0.6
-0.4
-0.2
N.D.
carbon source
alginate (C)
+0.1
+0.5
-0.3
-0.2
N.D.
motility_chemotaxis
R2A motility; outer cut
+0.0
+0.5
-0.4
-0.1
N.D.
no stress control
R2A no stress control
-0.0
-0.5
+0.6
-0.1
N.D.
temperature
R2A 21C
+0.0
+0.4
-0.2
+0.1
N.D.
temperature
R2A 37C
-0.1
+0.3
+0.1
-0.1
N.D.
carbon source
L-Arabinose (C)
+0.3
+0.2
-0.0
-0.2
N.D.
carbon source
L-Rhamnose (C)
-0.1
+0.7
-0.2
-0.1
N.D.
carbon source
Melibiose (C)
-0.0
+0.3
+0.1
+0.1
N.D.
carbon source
D-Xylose (C)
+0.1
+0.3
+0.3
+0.1
N.D.
stress
Esculin Monohydrate stress 5 mM
+0.0
+0.3
+0.4
+0.1
N.D.
carbon source
Pullulan (C)
+0.1
+0.4
+0.3
+0.1
N.D.
stress
Trimethoprim stress 0.05 mg/ml
-0.0
+0.5
+0.4
+0.2
N.D.
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