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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS18475 and ABZR88_RS18480 are separated by 261 nucleotides
ABZR88_RS18480 and ABZR88_RS18485 are separated by 46 nucleotides
ABZR88_RS18485 and ABZR88_RS18490 are separated by 99 nucleotides
ABZR88_RS18490 and ABZR88_RS18495 are separated by 2 nucleotides
ABZR88_RS18475: ABZR88_RS18475 - L-serine ammonia-lyase, at 4,506,324 to 4,507,751
_RS18475
ABZR88_RS18480: ABZR88_RS18480 - gliding motility-associated C-terminal domain-containing protein, at 4,508,013 to 4,510,070
_RS18480
ABZR88_RS18485: ABZR88_RS18485 - hypothetical protein, at 4,510,117 to 4,512,645
_RS18485
ABZR88_RS18490: ABZR88_RS18490 - phosphatidylglycerophosphatase A, at 4,512,745 to 4,513,206
_RS18490
ABZR88_RS18495: ABZR88_RS18495 - hypothetical protein, at 4,513,209 to 4,513,865
_RS18495
Group
Condition
ABZR88
_RS18475
ABZR88
_RS18480
ABZR88
_RS18485
ABZR88
_RS18490
ABZR88
_RS18495
motility_chemotaxis
R2A motility; outer cut
-0.3
+0.2
-0.1
N.D.
-0.5
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.3
-0.0
-0.1
N.D.
-0.2
motility_chemotaxis
R2A motility; outer cut
-0.3
+0.0
+0.0
N.D.
-0.2
carbon source
D-Xylose (C)
-0.2
+0.1
+0.0
N.D.
-0.2
stress
potassium fluoride stress 30 mM
-0.6
+0.1
+0.0
N.D.
+0.2
stress
Kanamycin sulfate stress 0.05 mg/ml
-0.3
+0.1
+0.1
N.D.
-0.2
stress
R2A_low_K2HPO4
-0.1
+0.1
+0.0
N.D.
-0.3
carbon source
L-Rhamnose (C)
-0.4
+0.0
+0.1
N.D.
-0.0
temperature
R2A 15C; 144 hours
-0.5
+0.1
-0.0
N.D.
+0.1
no stress control
R2A no stress control
-0.4
-0.3
+0.1
N.D.
+0.4
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
-0.2
+0.1
-0.1
N.D.
-0.1
stress
Kanamycin sulfate stress 0.05 mg/ml
-0.1
+0.1
+0.0
N.D.
-0.2
temperature
R2A 30C
-0.2
+0.2
+0.1
N.D.
-0.2
carbon source
L-Arabinose (C)
+0.1
+0.1
+0.0
N.D.
-0.4
carbon source
L-Arabinose (C)
+0.1
+0.1
-0.0
N.D.
-0.4
stress
potassium fluoride stress 30 mM
-0.4
-0.0
-0.0
N.D.
+0.3
motility_chemotaxis
R2A motility; outer cut
-0.3
+0.2
-0.1
N.D.
+0.1
temperature
R2A 15C; 72 hours
-0.3
+0.2
+0.0
N.D.
-0.1
carbon source
D-Glucose (C)
-0.0
+0.1
+0.1
N.D.
-0.2
motility_chemotaxis
R2A motility; outer cut
-0.1
+0.2
+0.2
N.D.
-0.2
carbon source
Melibiose (C)
-0.2
+0.0
+0.1
N.D.
+0.2
carbon source
D-Xylose (C)
-0.1
+0.1
+0.2
N.D.
-0.1
stress
Erythromycin stress 0.05 mg/ml
-0.2
+0.1
+0.1
N.D.
+0.3
stress
Erythromycin stress 0.05 mg/ml
-0.2
+0.1
+0.1
N.D.
+0.2
carbon source
D-Maltose (C)
+0.3
+0.0
+0.1
N.D.
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.3
+0.1
+0.1
N.D.
+0.3
temperature
R2A 15C; 144 hours
-0.3
+0.3
+0.0
N.D.
+0.3
carbon source
L-Rhamnose (C)
-0.2
+0.1
+0.2
N.D.
+0.2
stress
copper (II) chloride stress 1 mM
-0.1
+0.1
+0.1
N.D.
+0.3
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.2
+0.1
-0.0
N.D.
+1.0
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