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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS16985 and ABZR88_RS16990 overlap by 1 nucleotides
ABZR88_RS16990 and ABZR88_RS16995 overlap by 8 nucleotides
ABZR88_RS16995 and ABZR88_RS17000 are separated by 102 nucleotides
ABZR88_RS17000 and ABZR88_RS17005 are separated by 11 nucleotides
ABZR88_RS16985: ABZR88_RS16985 - rod shape-determining protein MreD, at 4,167,697 to 4,168,218
_RS16985
ABZR88_RS16990: ABZR88_RS16990 - penicillin-binding protein 2, at 4,168,218 to 4,170,191
_RS16990
ABZR88_RS16995: ABZR88_RS16995 - rod shape-determining protein RodA, at 4,170,184 to 4,171,458
_RS16995
ABZR88_RS17000: ABZR88_RS17000 - hypothetical protein, at 4,171,561 to 4,171,737
_RS17000
ABZR88_RS17005: ABZR88_RS17005 - peptidylprolyl isomerase, at 4,171,749 to 4,172,210
_RS17005
Group
Condition
ABZR88
_RS16985
ABZR88
_RS16990
ABZR88
_RS16995
ABZR88
_RS17000
ABZR88
_RS17005
carbon source
Pullulan (C)
N.D.
N.D.
N.D.
-1.6
-0.3
carbon source
Starch (C)
N.D.
N.D.
N.D.
-1.0
-0.5
carbon source
alginate (C)
N.D.
N.D.
N.D.
-1.0
-0.3
carbon source
alginate (C)
N.D.
N.D.
N.D.
-0.6
-0.6
carbon source
D-Maltose (C)
N.D.
N.D.
N.D.
-0.5
-0.4
carbon source
D-Maltose (C)
N.D.
N.D.
N.D.
-0.6
-0.2
stress
Esculin Monohydrate stress 5 mM
N.D.
N.D.
N.D.
-0.7
-0.1
carbon source
Melibiose (C)
N.D.
N.D.
N.D.
-0.9
+0.1
temperature
R2A 30C; 144 hours
N.D.
N.D.
N.D.
-0.4
-0.3
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
N.D.
N.D.
N.D.
-0.2
-0.4
temperature
R2A 15C; 72 hours
N.D.
N.D.
N.D.
-0.6
+0.0
carbon source
L-Rhamnose (C)
N.D.
N.D.
N.D.
-0.2
-0.3
motility_chemotaxis
R2A motility; outer cut
N.D.
N.D.
N.D.
-0.5
+0.2
carbon source
L-Rhamnose (C)
N.D.
N.D.
N.D.
-0.4
+0.3
motility_chemotaxis
R2A motility; outer cut
N.D.
N.D.
N.D.
+0.4
-0.4
carbon source
D-Fructose (C)
N.D.
N.D.
N.D.
+0.4
-0.2
temperature
R2A 15C; 144 hours
N.D.
N.D.
N.D.
+0.4
-0.2
stress
Erythromycin stress 0.05 mg/ml
N.D.
N.D.
N.D.
-0.2
+0.5
carbon source
D-Xylose (C)
N.D.
N.D.
N.D.
+0.4
-0.1
carbon source
L-Arabinose (C)
N.D.
N.D.
N.D.
+0.5
-0.1
motility_chemotaxis
R2A motility; outer cut
N.D.
N.D.
N.D.
+0.5
-0.0
carbon source
Pullulan (C)
N.D.
N.D.
N.D.
+0.6
-0.2
stress
Kanamycin sulfate stress 0.05 mg/ml
N.D.
N.D.
N.D.
+0.5
-0.1
stress
R2A_high_K2HPO4
N.D.
N.D.
N.D.
+0.3
+0.2
stress
potassium fluoride stress 30 mM
N.D.
N.D.
N.D.
+0.5
+0.1
temperature
R2A 15C; 72 hours
N.D.
N.D.
N.D.
+1.0
-0.3
temperature
R2A 15C; 144 hours
N.D.
N.D.
N.D.
+0.7
+0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
N.D.
N.D.
N.D.
+0.5
+0.7
carbon source
Melibiose (C)
N.D.
N.D.
N.D.
+1.1
+0.2
motility_chemotaxis
R2A motility; outer cut
N.D.
N.D.
N.D.
+1.3
+0.1
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