Fitness for 5 genes in Mucilaginibacter yixingensis YX-36 DSM 26809

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500 ntABZR88_RS16905 and ABZR88_RS16910 are separated by 282 nucleotidesABZR88_RS16910 and ABZR88_RS16915 are separated by 88 nucleotidesABZR88_RS16915 and ABZR88_RS16920 overlap by 4 nucleotidesABZR88_RS16920 and ABZR88_RS16925 are separated by 537 nucleotides ABZR88_RS16905: ABZR88_RS16905 - uroporphyrinogen-III C-methyltransferase, at 4,146,498 to 4,147,229 _RS16905 ABZR88_RS16910: ABZR88_RS16910 - nitrite reductase large subunit NirB, at 4,147,512 to 4,150,001 _RS16910 ABZR88_RS16915: ABZR88_RS16915 - nitrite reductase small subunit NirD, at 4,150,090 to 4,150,440 _RS16915 ABZR88_RS16920: ABZR88_RS16920 - Crp/Fnr family transcriptional regulator, at 4,150,437 to 4,151,087 _RS16920 ABZR88_RS16925: ABZR88_RS16925 - alginate export family protein, at 4,151,625 to 4,153,157 _RS16925
Group Condition ABZR88_RS16905 ABZR88_RS16910 ABZR88_RS16915 ABZR88_RS16920 ABZR88_RS16925
no stress control R2A no stress control N.D. +0.3 -4.0 +1.1 +0.2
stress Erythromycin stress 0.05 mg/ml N.D. -0.3 +0.0 -0.7 -0.8
stress Erythromycin stress 0.05 mg/ml N.D. +0.3 +0.2 -0.5 -0.7
stress R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM N.D. +0.1 -0.8 +0.3 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days N.D. -0.5 -0.1 +0.4 +0.1
carbon source L-Rhamnose (C) N.D. +0.1 -0.0 +0.6 -0.4
carbon source L-Rhamnose (C) N.D. +0.3 -0.1 +0.5 -0.4
stress R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM N.D. +0.3 +0.1 +0.3 -0.3
motility_chemotaxis R2A motility; outer cut N.D. +0.1 -0.4 +0.7 +0.1
motility_chemotaxis R2A motility; outer cut N.D. +0.2 -0.9 +0.8 +0.6
temperature R2A 30C N.D. +0.1 -0.3 +0.8 +0.4
carbon source Pullulan (C) N.D. +0.1 +0.3 +0.5 +0.2
stress Esculin Monohydrate stress 5 mM N.D. +0.1 +0.2 +0.6 +0.2
carbon source D-Xylose (C) N.D. +0.4 +0.1 +0.8 +0.0
carbon source D-Xylose (C) N.D. +0.5 +0.0 +0.9 -0.1
stress NaCl stress 100 mM N.D. +0.3 +0.1 +0.8 +0.2
temperature R2A 30C N.D. +0.2 +0.1 +0.8 +0.5
carbon source Pullulan (C) N.D. +0.3 +0.5 +0.6 +0.3
stress Kanamycin sulfate stress 0.05 mg/ml N.D. +0.1 -0.1 +1.1 +0.6
temperature R2A 21C N.D. +0.3 +0.1 +0.8 +0.4
motility_chemotaxis R2A motility; outer cut N.D. +0.4 +0.0 +0.9 +0.4
stress Quercetin stress 0.05 mg/ml N.D. +0.4 +0.1 +0.9 +0.4
stress Quercetin stress 0.05 mg/ml N.D. +0.4 +0.1 +1.0 +0.3
stress Kanamycin sulfate stress 0.05 mg/ml N.D. +0.2 +0.1 +1.1 +0.5
motility_chemotaxis R2A motility; outer cut N.D. +0.3 -0.3 +1.5 +1.0
temperature R2A 15C; 72 hours N.D. +0.1 -0.1 +1.7 +0.8
temperature R2A 30C; 144 hours N.D. +0.4 -0.0 +1.7 +0.5
temperature R2A 15C; 72 hours N.D. +0.3 -0.0 +1.8 +0.7
temperature R2A 15C; 144 hours N.D. +0.2 -0.4 +2.3 +0.9
temperature R2A 15C; 144 hours N.D. +0.5 -0.3 +2.4 +0.8
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