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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS16525 and ABZR88_RS16530 overlap by 8 nucleotides
ABZR88_RS16530 and ABZR88_RS16535 overlap by 4 nucleotides
ABZR88_RS16535 and ABZR88_RS16540 overlap by 1 nucleotides
ABZR88_RS16540 and ABZR88_RS16545 are separated by 361 nucleotides
ABZR88_RS16525: ABZR88_RS16525 - cytochrome b5 domain-containing protein, at 4,055,863 to 4,056,099
_RS16525
ABZR88_RS16530: ABZR88_RS16530 - lycopene cyclase domain-containing protein, at 4,056,092 to 4,056,799
_RS16530
ABZR88_RS16535: ABZR88_RS16535 - hypothetical protein, at 4,056,796 to 4,057,323
_RS16535
ABZR88_RS16540: ABZR88_RS16540 - phytoene/squalene synthase family protein, at 4,057,323 to 4,058,171
_RS16540
ABZR88_RS16545: ABZR88_RS16545 - NAD(P)/FAD-dependent oxidoreductase, at 4,058,533 to 4,060,017
_RS16545
Group
Condition
ABZR88
_RS16525
ABZR88
_RS16530
ABZR88
_RS16535
ABZR88
_RS16540
ABZR88
_RS16545
temperature
R2A 15C; 144 hours
-1.1
-0.2
+0.1
-0.5
-0.2
no stress control
R2A no stress control
+0.2
-0.6
+0.1
-0.1
-1.6
stress
R2A_low_K2HPO4
-0.8
-0.2
-0.4
-0.2
-0.2
carbon source
Pullulan (C)
-0.1
-0.1
-0.1
+0.1
-1.5
motility_chemotaxis
R2A motility; outer cut
-0.4
-0.2
-0.4
-0.1
-0.5
temperature
R2A 15C; 72 hours
-0.6
-0.2
-0.2
-0.1
-0.5
carbon source
Pullulan (C)
-0.5
+0.1
-0.0
-0.5
-0.7
temperature
R2A 15C; 144 hours
-1.0
-0.1
+0.1
-0.3
-0.3
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.4
-0.5
+0.2
-0.1
-0.7
temperature
R2A 21C
-0.8
-0.2
-0.2
-0.1
-0.1
motility_chemotaxis
R2A motility; outer cut
-0.4
-0.2
+0.2
+0.2
-1.1
carbon source
Starch (C)
-0.2
+0.1
-0.1
-0.4
-0.7
stress
R2A_low_K2HPO4
-0.7
-0.0
-0.3
-0.1
-0.2
stress
R2A_high_K2HPO4
-0.5
-0.1
-0.2
-0.3
-0.2
temperature
R2A 30C
-0.3
-0.2
-0.1
-0.3
-0.3
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.3
-0.0
+0.1
-0.4
-0.6
stress
NaCl stress 100 mM
-0.3
+0.1
-0.2
-0.2
-0.4
carbon source
Pullulan (C)
-0.5
+0.0
+0.3
-0.3
-0.6
carbon source
Pullulan (C)
-0.4
+0.3
-0.3
+0.1
-0.2
motility_chemotaxis
R2A motility; outer cut
+0.1
+0.3
+0.0
-0.0
-0.8
carbon source
L-Arabinose (C)
+0.5
+0.0
-0.2
-0.2
-0.6
stress
copper (II) chloride stress 1 mM
-0.0
-0.1
+0.2
+0.3
-0.6
carbon source
L-Rhamnose (C)
+0.1
-0.4
+0.1
-0.5
+0.6
carbon source
D-Xylose (C)
+0.1
-0.2
+0.5
-0.3
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.0
-0.2
+0.3
+0.3
-0.4
carbon source
Melibiose (C)
+0.1
+0.1
+0.4
-0.1
-0.4
carbon source
L-Arabinose (C)
+0.9
-0.1
-0.3
-0.2
-0.2
carbon source
alginate (C)
+0.3
+0.2
+0.2
+0.2
-0.6
stress
Erythromycin stress 0.05 mg/ml
-0.3
+0.2
+0.1
+0.6
+0.6
stress
Erythromycin stress 0.05 mg/ml
+0.0
+0.5
+0.1
+0.2
+0.7
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ABZR88_RS16535
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