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Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS15355 and ABZR88_RS15360 overlap by 4 nucleotides
ABZR88_RS15360 and ABZR88_RS15365 are separated by 138 nucleotides
ABZR88_RS15365 and ABZR88_RS15370 are separated by 89 nucleotides
ABZR88_RS15370 and ABZR88_RS15375 are separated by 263 nucleotides
ABZR88_RS15355: ABZR88_RS15355 - bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase, at 3,799,421 to 3,800,377
_RS15355
ABZR88_RS15360: ABZR88_RS15360 - MFS transporter, at 3,800,374 to 3,801,696
_RS15360
ABZR88_RS15365: ABZR88_RS15365 - hypothetical protein, at 3,801,835 to 3,804,612
_RS15365
ABZR88_RS15370: ABZR88_RS15370 - transcriptional regulator, at 3,804,702 to 3,805,112
_RS15370
ABZR88_RS15375: ABZR88_RS15375 - TonB-dependent receptor, at 3,805,376 to 3,807,832
_RS15375
Group
Condition
ABZR88
_RS15355
ABZR88
_RS15360
ABZR88
_RS15365
ABZR88
_RS15370
ABZR88
_RS15375
temperature
R2A 30C; 144 hours
+0.2
-0.2
-0.1
-0.8
+0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
-0.0
+0.1
-0.9
-0.0
no stress control
R2A no stress control
-0.1
+0.1
-0.2
-0.1
-0.3
stress
Esculin Monohydrate stress 5 mM
+0.2
-0.1
-0.1
-0.4
-0.0
temperature
R2A 15C; 72 hours
+0.1
-0.1
+0.0
-0.6
+0.1
stress
Trimethoprim stress 0.05 mg/ml
+0.0
+0.1
+0.1
-0.4
-0.0
carbon source
Starch (C)
+0.2
-0.2
-0.1
-0.1
+0.1
temperature
R2A 37C
+0.2
-0.2
+0.0
-0.1
-0.1
stress
Erythromycin stress 0.05 mg/ml
+0.1
-0.1
-0.1
-0.2
+0.1
temperature
R2A 30C
+0.2
+0.1
-0.1
-0.4
+0.0
stress
R2A with Apigenin 50 ug/ml
+0.3
-0.0
-0.1
-0.2
+0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.2
+0.0
+0.0
-0.4
+0.1
temperature
R2A 15C; 144 hours
+0.1
+0.0
-0.2
-0.2
+0.1
carbon source
Melibiose (C)
+0.3
-0.1
-0.1
-0.1
-0.1
stress
R2A_high_K2HPO4
+0.1
+0.1
-0.2
-0.1
+0.0
temperature
R2A 15C; 72 hours
+0.1
-0.1
+0.2
-0.3
+0.1
stress
R2A_low_K2HPO4
+0.2
+0.2
-0.1
-0.3
+0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.4
-0.1
+0.2
-0.6
+0.1
temperature
R2A 21C
+0.3
+0.1
-0.0
-0.4
+0.0
carbon source
D-Maltose (C)
+0.2
-0.0
+0.0
-0.2
+0.1
stress
Quercetin stress 0.05 mg/ml
+0.2
+0.2
+0.0
-0.2
+0.1
motility_chemotaxis
R2A motility; outer cut
+0.2
-0.1
+0.1
+0.0
+0.2
stress
NaCl stress 100 mM
+0.2
+0.1
-0.1
+0.2
-0.0
carbon source
alginate (C)
+0.2
-0.0
-0.1
+0.2
+0.1
carbon source
D-Xylose (C)
+0.4
+0.1
-0.1
+0.0
+0.0
motility_chemotaxis
R2A motility; outer cut
+0.2
+0.1
-0.0
+0.2
+0.1
carbon source
L-Arabinose (C)
+0.2
+0.1
+0.1
+0.1
+0.1
carbon source
Pullulan (C)
+0.3
-0.0
-0.1
+0.3
+0.1
motility_chemotaxis
R2A motility; outer cut
+0.0
-0.1
+0.1
+0.7
-0.0
carbon source
Pullulan (C)
+0.3
+0.2
+0.0
+0.1
+0.1
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