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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS14795 and ABZR88_RS14800 are separated by 61 nucleotides
ABZR88_RS14800 and ABZR88_RS14805 are separated by 88 nucleotides
ABZR88_RS14805 and ABZR88_RS14810 are separated by 220 nucleotides
ABZR88_RS14810 and ABZR88_RS14815 are separated by 146 nucleotides
ABZR88_RS14795: ABZR88_RS14795 - glycosyl hydrolase 115 family protein, at 3,655,166 to 3,658,081
_RS14795
ABZR88_RS14800: ABZR88_RS14800 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 3,658,143 to 3,661,172
_RS14800
ABZR88_RS14805: ABZR88_RS14805 - trehalase family glycosidase, at 3,661,261 to 3,662,580
_RS14805
ABZR88_RS14810: ABZR88_RS14810 - hypothetical protein, at 3,662,801 to 3,664,030
_RS14810
ABZR88_RS14815: ABZR88_RS14815 - FAD-dependent oxidoreductase, at 3,664,177 to 3,667,524
_RS14815
Group
Condition
ABZR88
_RS14795
ABZR88
_RS14800
ABZR88
_RS14805
ABZR88
_RS14810
ABZR88
_RS14815
no stress control
R2A no stress control
+0.1
-0.2
-0.5
-0.3
-0.0
carbon source
L-Arabinose (C)
-0.2
-0.0
+0.1
-0.2
-0.1
stress
NaCl stress 100 mM
-0.1
+0.1
-0.2
-0.0
-0.1
stress
Erythromycin stress 0.05 mg/ml
-0.1
+0.1
-0.2
+0.0
-0.1
carbon source
Beta-Lactose (C)
-0.0
+0.1
+0.1
-0.1
-0.2
stress
potassium fluoride stress 30 mM
-0.1
+0.1
-0.0
+0.1
-0.1
carbon source
Melibiose (C)
-0.3
-0.0
+0.2
+0.1
-0.0
stress
Quercetin stress 0.05 mg/ml
-0.0
-0.0
+0.0
+0.2
-0.2
carbon source
Melibiose (C)
-0.2
-0.0
+0.2
+0.0
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
-0.1
-0.1
+0.1
+0.1
carbon source
D-Maltose (C)
-0.1
+0.1
+0.2
+0.0
-0.1
carbon source
D-Xylose (C)
-0.1
+0.1
+0.1
+0.1
-0.0
stress
copper (II) chloride stress 1 mM
-0.1
+0.0
+0.2
+0.2
-0.0
motility_chemotaxis
R2A motility; outer cut
+0.2
+0.1
-0.2
-0.0
+0.1
carbon source
alginate (C)
+0.1
-0.0
+0.2
+0.2
-0.1
carbon source
alginate (C)
-0.1
+0.1
+0.2
+0.2
-0.1
stress
R2A_low_K2HPO4
-0.0
+0.1
+0.1
+0.2
+0.0
stress
R2A with Apigenin 50 ug/ml
+0.0
+0.1
+0.1
+0.2
-0.0
carbon source
D-Xylose (C)
-0.0
+0.1
+0.2
+0.1
+0.0
motility_chemotaxis
R2A motility; outer cut
+0.4
+0.0
+0.0
-0.1
+0.1
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
+0.1
-0.0
+0.1
+0.2
+0.1
temperature
R2A 30C; 144 hours
+0.1
+0.0
+0.1
+0.2
+0.1
temperature
R2A 15C; 72 hours
+0.2
+0.1
+0.1
+0.2
+0.0
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
+0.1
+0.1
+0.1
+0.2
+0.1
temperature
R2A 15C; 72 hours
+0.1
+0.2
+0.3
+0.1
-0.0
motility_chemotaxis
R2A motility; outer cut
+0.4
+0.2
+0.0
+0.1
+0.0
temperature
R2A 15C; 144 hours
+0.2
+0.1
+0.2
+0.2
+0.1
temperature
R2A 15C; 144 hours
+0.1
+0.1
+0.3
+0.2
+0.1
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
+0.1
+0.1
+0.3
+0.3
+0.1
motility_chemotaxis
R2A motility; outer cut
+0.3
+0.1
+0.3
+0.1
+0.1
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