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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS13615 and ABZR88_RS13620 are separated by 75 nucleotides
ABZR88_RS13620 and ABZR88_RS13625 are separated by 94 nucleotides
ABZR88_RS13625 and ABZR88_RS13630 are separated by 3 nucleotides
ABZR88_RS13630 and ABZR88_RS13635 are separated by 248 nucleotides
ABZR88_RS13615: ABZR88_RS13615 - S9 family peptidase, at 3,405,944 to 3,407,356
_RS13615
ABZR88_RS13620: ABZR88_RS13620 - methionyl-tRNA formyltransferase, at 3,407,432 to 3,408,388
_RS13620
ABZR88_RS13625: ABZR88_RS13625 - aspartyl/asparaginyl beta-hydroxylase domain-containing protein, at 3,408,483 to 3,409,205
_RS13625
ABZR88_RS13630: ABZR88_RS13630 - hypothetical protein, at 3,409,209 to 3,410,144
_RS13630
ABZR88_RS13635: ABZR88_RS13635 - phage tail protein, at 3,410,393 to 3,410,923
_RS13635
Group
Condition
ABZR88
_RS13615
ABZR88
_RS13620
ABZR88
_RS13625
ABZR88
_RS13630
ABZR88
_RS13635
motility_chemotaxis
R2A motility; outer cut
-0.2
-0.1
-0.4
-0.1
-0.3
temperature
R2A 37C
+0.0
-0.1
-0.3
-0.1
-0.4
carbon source
Pullulan (C)
-0.1
-0.2
-0.3
+0.1
-0.3
carbon source
L-Rhamnose (C)
-0.3
-0.1
-0.5
+0.1
+0.1
carbon source
Melibiose (C)
-0.1
-0.1
-0.2
-0.1
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.4
+0.2
-0.2
-0.6
-0.4
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.1
-0.1
-0.3
+0.1
-0.1
stress
R2A_low_K2HPO4
+0.0
-0.2
-0.3
+0.1
-0.1
stress
Erythromycin stress 0.05 mg/ml
-0.1
-0.0
-0.2
+0.0
-0.2
carbon source
alginate (C)
-0.2
+0.1
-0.1
-0.1
-0.2
carbon source
D-Maltose (C)
-0.1
-0.0
-0.4
+0.2
-0.1
motility_chemotaxis
R2A motility; outer cut
-0.1
+0.2
-0.4
-0.1
+0.0
carbon source
Pullulan (C)
-0.2
-0.0
-0.3
+0.2
-0.0
no stress control
R2A no stress control
-0.1
-0.3
-0.1
-0.2
+0.4
carbon source
D-Xylose (C)
+0.1
-0.0
-0.2
+0.0
-0.2
carbon source
Starch (C)
-0.2
-0.1
-0.0
+0.2
-0.2
stress
Quercetin stress 0.05 mg/ml
+0.1
-0.2
-0.1
+0.1
-0.2
stress
Esculin Monohydrate stress 5 mM
-0.0
+0.0
-0.3
+0.1
-0.1
carbon source
L-Rhamnose (C)
+0.2
-0.2
-0.3
-0.0
+0.1
carbon source
D-Glucose (C)
-0.0
+0.1
-0.1
-0.0
-0.2
temperature
R2A 30C; 144 hours
-0.1
+0.2
-0.2
+0.0
-0.0
carbon source
Pullulan (C)
-0.1
-0.0
-0.3
+0.2
+0.1
stress
R2A_high_K2HPO4
+0.0
+0.1
-0.1
+0.1
-0.2
carbon source
Beta-Lactose (C)
-0.1
-0.1
-0.1
+0.3
-0.1
stress
copper (II) chloride stress 1 mM
+0.0
-0.0
+0.0
+0.1
-0.2
temperature
R2A 15C; 144 hours
-0.2
+0.2
-0.2
+0.1
+0.0
temperature
R2A 15C; 144 hours
-0.1
+0.0
-0.0
+0.3
-0.1
carbon source
Starch (C)
-0.1
+0.3
-0.4
+0.2
+0.1
temperature
R2A 15C; 72 hours
+0.0
+0.0
-0.1
+0.2
+0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.1
+0.0
+0.2
-0.2
+0.2
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