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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS13475 and ABZR88_RS13480 are separated by 1 nucleotides
ABZR88_RS13480 and ABZR88_RS13485 are separated by 90 nucleotides
ABZR88_RS13485 and ABZR88_RS13490 are separated by 16 nucleotides
ABZR88_RS13490 and ABZR88_RS13495 are separated by 351 nucleotides
ABZR88_RS13475: ABZR88_RS13475 - glycoside hydrolase family 2 protein, at 3,350,887 to 3,352,749
_RS13475
ABZR88_RS13480: ABZR88_RS13480 - glycoside hydrolase family 43 protein, at 3,352,751 to 3,353,872
_RS13480
ABZR88_RS13485: ABZR88_RS13485 - RagB/SusD family nutrient uptake outer membrane protein, at 3,353,963 to 3,355,594
_RS13485
ABZR88_RS13490: ABZR88_RS13490 - SusC/RagA family TonB-linked outer membrane protein, at 3,355,611 to 3,358,637
_RS13490
ABZR88_RS13495: ABZR88_RS13495 - hybrid sensor histidine kinase/response regulator transcription factor, at 3,358,989 to 3,363,032
_RS13495
Group
Condition
ABZR88
_RS13475
ABZR88
_RS13480
ABZR88
_RS13485
ABZR88
_RS13490
ABZR88
_RS13495
no stress control
R2A no stress control
-0.3
-0.2
-0.4
-0.1
+0.2
carbon source
L-Arabinose (C)
+0.0
-0.3
-0.3
+0.0
-0.1
carbon source
alginate (C)
-0.1
-0.2
-0.2
-0.1
-0.0
carbon source
D-Xylose (C)
-0.1
-0.2
-0.1
-0.0
-0.0
temperature
R2A 30C; 144 hours
-0.1
-0.2
-0.0
+0.1
-0.1
stress
R2A_high_K2HPO4
-0.1
-0.1
-0.2
-0.0
-0.1
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.1
-0.1
-0.2
-0.0
+0.0
motility_chemotaxis
R2A motility; outer cut
+0.0
-0.1
-0.1
+0.2
-0.2
temperature
R2A 15C; 72 hours
-0.1
-0.2
-0.1
+0.1
+0.1
carbon source
L-Arabinose (C)
+0.1
-0.0
-0.1
-0.1
-0.1
carbon source
Pullulan (C)
+0.1
-0.1
-0.1
-0.1
+0.0
carbon source
Beta-Lactose (C)
+0.1
+0.0
-0.3
+0.0
-0.1
stress
Trimethoprim stress 0.05 mg/ml
-0.1
+0.1
-0.0
-0.1
-0.1
carbon source
Starch (C)
-0.0
-0.0
-0.2
+0.0
+0.1
stress
Esculin Monohydrate stress 5 mM
-0.0
+0.1
-0.2
+0.0
-0.1
carbon source
D-Fructose (C)
-0.1
+0.1
+0.0
-0.1
-0.1
carbon source
D-Maltose (C)
+0.0
-0.1
-0.2
+0.0
+0.1
stress
Erythromycin stress 0.05 mg/ml
-0.1
+0.1
-0.2
-0.0
+0.0
carbon source
alginate (C)
+0.1
-0.1
-0.2
-0.0
+0.1
temperature
R2A 30C
-0.2
+0.0
-0.1
+0.1
+0.0
temperature
R2A 15C; 72 hours
-0.0
-0.2
-0.1
+0.1
+0.1
carbon source
L-Rhamnose (C)
+0.0
+0.0
-0.2
-0.0
+0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.0
-0.1
-0.2
+0.1
+0.2
motility_chemotaxis
R2A motility; outer cut
-0.2
+0.1
+0.1
+0.0
-0.1
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.1
+0.1
+0.1
+0.1
carbon source
Pullulan (C)
+0.1
+0.1
-0.2
+0.0
+0.1
stress
R2A_high_K2HPO4
-0.1
+0.2
-0.1
+0.0
+0.0
motility_chemotaxis
R2A motility; outer cut
+0.1
-0.1
+0.1
-0.0
+0.2
carbon source
Beta-Lactose (C)
+0.1
+0.2
-0.0
-0.0
-0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.0
-0.1
+0.2
-0.0
+0.1
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ABZR88_RS13485
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