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Cofit
Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS13240 and ABZR88_RS13245 are separated by 152 nucleotides
ABZR88_RS13245 and ABZR88_RS13250 are separated by 219 nucleotides
ABZR88_RS13250 and ABZR88_RS13255 are separated by 25 nucleotides
ABZR88_RS13255 and ABZR88_RS13260 are separated by 15 nucleotides
ABZR88_RS13240: ABZR88_RS13240 - hypothetical protein, at 3,280,160 to 3,280,963
_RS13240
ABZR88_RS13245: ABZR88_RS13245 - alkaline phosphatase family protein, at 3,281,116 to 3,283,812
_RS13245
ABZR88_RS13250: ABZR88_RS13250 - hypothetical protein, at 3,284,032 to 3,284,205
_RS13250
ABZR88_RS13255: ABZR88_RS13255 - hypothetical protein, at 3,284,231 to 3,285,007
_RS13255
ABZR88_RS13260: ABZR88_RS13260 - SelT/SelW/SelH family protein, at 3,285,023 to 3,285,313
_RS13260
Group
Condition
ABZR88
_RS13240
ABZR88
_RS13245
ABZR88
_RS13250
ABZR88
_RS13255
ABZR88
_RS13260
stress
Quercetin stress 0.05 mg/ml
-0.5
-0.1
-0.3
-0.3
-0.5
temperature
R2A 15C; 72 hours
-0.2
-0.0
-1.5
+0.0
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.0
-0.0
-0.8
-0.3
-0.5
carbon source
Pullulan (C)
-0.1
-0.1
-1.3
+0.1
-0.3
temperature
R2A 15C; 72 hours
-0.2
-0.2
-0.6
+0.1
-0.5
carbon source
alginate (C)
-0.4
-0.1
-0.3
+0.0
-0.5
stress
copper (II) chloride stress 1 mM
-0.3
-0.1
-0.1
+0.1
-0.7
carbon source
D-Fructose (C)
-0.1
-0.1
-0.5
-0.2
-0.2
stress
Esculin Monohydrate stress 5 mM
-0.1
-0.2
-0.5
-0.1
-0.4
temperature
R2A 30C
+0.0
-0.2
-0.4
-0.2
-0.4
carbon source
D-Maltose (C)
+0.2
-0.1
-1.3
+0.1
-0.1
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.1
-0.1
-0.4
-0.2
-0.3
temperature
R2A 15C; 144 hours
-0.2
-0.1
-0.2
+0.1
-0.8
carbon source
Beta-Lactose (C)
-0.3
-0.1
-0.6
+0.2
-0.1
no stress control
R2A no stress control
+0.0
+0.0
+0.1
-0.3
-0.9
stress
Esculin Monohydrate stress 5 mM
+0.1
-0.1
-0.4
-0.2
-0.3
carbon source
Pullulan (C)
+0.2
-0.2
-0.8
-0.0
-0.2
stress
R2A_high_K2HPO4
-0.3
-0.0
-0.4
+0.1
-0.3
carbon source
L-Rhamnose (C)
-0.6
-0.1
-0.1
-0.2
+0.3
carbon source
D-Maltose (C)
+0.1
-0.1
-1.0
+0.2
-0.0
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.1
-0.4
+0.3
-0.4
carbon source
D-Glucose (C)
+0.1
-0.1
-0.2
+0.2
-0.6
carbon source
Pullulan (C)
+0.0
-0.1
-0.9
+0.2
+0.0
carbon source
Melibiose (C)
+0.3
-0.1
-0.9
-0.0
+0.1
stress
copper (II) chloride stress 1 mM
-0.1
-0.1
+0.2
+0.1
-0.5
stress
Trimethoprim stress 0.05 mg/ml
-0.2
+0.1
+0.3
+0.3
-0.4
stress
Erythromycin stress 0.05 mg/ml
-0.2
+0.1
-0.1
-0.2
+0.6
stress
Erythromycin stress 0.05 mg/ml
+0.2
-0.0
-0.4
-0.1
+0.5
motility_chemotaxis
R2A motility; outer cut
+0.2
-0.0
+0.4
+0.1
-0.3
carbon source
Beta-Lactose (C)
-0.1
-0.1
+0.4
+0.4
+0.1
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ABZR88_RS13250
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