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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS13025 and ABZR88_RS13030 are separated by 144 nucleotides
ABZR88_RS13030 and ABZR88_RS13035 are separated by 13 nucleotides
ABZR88_RS13035 and ABZR88_RS13040 are separated by 8 nucleotides
ABZR88_RS13040 and ABZR88_RS13045 overlap by 1 nucleotides
ABZR88_RS13025: ABZR88_RS13025 - MFS transporter, at 3,218,721 to 3,219,980
_RS13025
ABZR88_RS13030: ABZR88_RS13030 - SDR family NAD(P)-dependent oxidoreductase, at 3,220,125 to 3,220,883
_RS13030
ABZR88_RS13035: ABZR88_RS13035 - RraA family protein, at 3,220,897 to 3,221,589
_RS13035
ABZR88_RS13040: ABZR88_RS13040 - glucuronate isomerase, at 3,221,598 to 3,223,010
_RS13040
ABZR88_RS13045: ABZR88_RS13045 - enolase C-terminal domain-like protein, at 3,223,010 to 3,224,137
_RS13045
Group
Condition
ABZR88
_RS13025
ABZR88
_RS13030
ABZR88
_RS13035
ABZR88
_RS13040
ABZR88
_RS13045
carbon source
Pullulan (C)
+0.0
-0.5
-0.1
-0.1
-0.2
carbon source
Pullulan (C)
-0.1
-0.4
-0.1
+0.1
-0.1
carbon source
Starch (C)
-0.1
-0.3
-0.1
-0.1
-0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.0
-0.1
-0.1
-0.3
-0.1
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.1
-0.1
-0.1
-0.2
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.1
-0.1
-0.1
-0.0
-0.2
stress
R2A with Apigenin 50 ug/ml
-0.1
-0.1
+0.1
-0.2
-0.2
stress
Erythromycin stress 0.05 mg/ml
-0.1
-0.1
-0.2
-0.1
-0.0
stress
Quercetin stress 0.05 mg/ml
-0.1
-0.2
-0.1
-0.1
+0.0
temperature
R2A 30C; 144 hours
-0.3
+0.2
-0.1
-0.2
-0.1
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.2
-0.0
-0.1
+0.2
-0.2
carbon source
L-Rhamnose (C)
+0.1
-0.1
-0.1
-0.3
+0.2
carbon source
alginate (C)
-0.0
-0.3
-0.0
+0.1
+0.1
temperature
R2A 30C
-0.1
+0.2
+0.1
-0.3
-0.0
carbon source
L-Arabinose (C)
+0.2
-0.4
-0.3
+0.2
+0.0
carbon source
D-Maltose (C)
-0.2
+0.1
-0.0
+0.1
-0.1
carbon source
D-Fructose (C)
-0.0
+0.1
-0.2
-0.1
+0.1
carbon source
Pullulan (C)
+0.0
+0.2
+0.2
-0.4
-0.1
carbon source
Beta-Lactose (C)
-0.1
-0.4
+0.3
+0.1
+0.0
carbon source
Pullulan (C)
-0.3
-0.1
+0.2
+0.1
+0.0
motility_chemotaxis
R2A motility; outer cut
-0.1
+0.3
-0.3
+0.2
-0.1
stress
Esculin Monohydrate stress 5 mM
-0.1
+0.3
-0.1
-0.1
-0.0
motility_chemotaxis
R2A motility; outer cut
-0.2
-0.0
+0.2
+0.3
-0.2
temperature
R2A 15C; 144 hours
-0.4
+0.4
+0.2
-0.2
+0.1
motility_chemotaxis
R2A motility; outer cut
-0.1
+0.2
-0.2
+0.1
+0.1
temperature
R2A 15C; 144 hours
-0.2
+0.6
-0.0
-0.1
-0.1
carbon source
L-Rhamnose (C)
+0.2
-0.5
+0.3
-0.0
+0.2
no stress control
R2A no stress control
-0.2
+0.4
+0.3
-0.2
-0.1
carbon source
Melibiose (C)
+0.2
+0.2
-0.2
+0.1
-0.1
stress
Trimethoprim stress 0.05 mg/ml
+0.2
+0.1
+0.1
+0.0
+0.1
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