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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS12985 and ABZR88_RS12990 are separated by 100 nucleotides
ABZR88_RS12990 and ABZR88_RS12995 are separated by 20 nucleotides
ABZR88_RS12995 and ABZR88_RS13000 are separated by 252 nucleotides
ABZR88_RS13000 and ABZR88_RS13005 are separated by 58 nucleotides
ABZR88_RS12985: ABZR88_RS12985 - alpha-L-fucosidase, at 3,197,929 to 3,199,815
_RS12985
ABZR88_RS12990: ABZR88_RS12990 - TIM-barrel domain-containing protein, at 3,199,916 to 3,202,069
_RS12990
ABZR88_RS12995: ABZR88_RS12995 - glycoside hydrolase N-terminal domain-containing protein, at 3,202,090 to 3,204,669
_RS12995
ABZR88_RS13000: ABZR88_RS13000 - glycoside hydrolase family 88 protein, at 3,204,922 to 3,206,175
_RS13000
ABZR88_RS13005: ABZR88_RS13005 - alginate lyase family protein, at 3,206,234 to 3,207,451
_RS13005
Group
Condition
ABZR88
_RS12985
ABZR88
_RS12990
ABZR88
_RS12995
ABZR88
_RS13000
ABZR88
_RS13005
no stress control
R2A no stress control
+0.1
-0.2
-0.3
-0.2
-1.1
temperature
R2A 30C; 144 hours
-0.2
-0.3
-0.3
-0.4
-0.1
stress
R2A with Apigenin 50 ug/ml
-0.1
-0.2
-0.2
-0.0
-0.2
carbon source
Beta-Lactose (C)
-0.2
-0.1
+0.0
+0.1
-0.3
temperature
R2A 15C; 72 hours
-0.1
-0.3
-0.2
-0.1
+0.2
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.1
-0.1
-0.3
-0.1
+0.2
carbon source
Starch (C)
-0.2
-0.2
+0.1
+0.0
-0.1
temperature
R2A 15C; 144 hours
-0.2
-0.3
-0.3
-0.0
+0.4
carbon source
L-Rhamnose (C)
-0.1
-0.1
-0.0
-0.2
+0.1
temperature
R2A 15C; 72 hours
-0.1
-0.4
+0.1
-0.3
+0.4
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.1
-0.0
-0.2
-0.0
+0.1
carbon source
Starch (C)
-0.1
-0.0
+0.1
+0.0
-0.2
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.3
+0.2
-0.1
+0.1
carbon source
D-Maltose (C)
+0.0
-0.0
+0.0
+0.2
-0.3
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.2
-0.1
-0.3
+0.6
stress
potassium fluoride stress 30 mM
-0.2
+0.0
-0.1
+0.2
+0.1
temperature
R2A 15C; 144 hours
-0.1
-0.2
+0.1
+0.2
+0.1
carbon source
Beta-Lactose (C)
+0.2
-0.2
+0.1
+0.1
-0.2
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.1
+0.0
-0.2
+0.4
carbon source
L-Rhamnose (C)
-0.2
+0.1
+0.2
+0.2
-0.2
carbon source
L-Arabinose (C)
-0.2
+0.2
+0.2
+0.1
-0.1
stress
R2A_low_K2HPO4
-0.1
-0.0
-0.0
-0.0
+0.3
carbon source
D-Maltose (C)
-0.2
+0.0
+0.0
+0.3
+0.1
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
+0.0
+0.0
-0.1
+0.1
+0.2
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
+0.0
+0.1
-0.1
+0.1
+0.3
carbon source
L-Arabinose (C)
+0.1
-0.1
+0.1
+0.3
+0.1
stress
Trimethoprim stress 0.05 mg/ml
-0.1
+0.3
+0.2
-0.0
+0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
+0.1
-0.2
+0.2
+0.2
carbon source
Melibiose (C)
+0.0
+0.1
+0.2
+0.1
+0.2
carbon source
Melibiose (C)
-0.0
+0.2
+0.0
+0.4
+0.2
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ABZR88_RS12995
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