Fitness for 5 genes in Mucilaginibacter yixingensis YX-36 DSM 26809

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500 ntABZR88_RS12890 and ABZR88_RS12895 are separated by 164 nucleotidesABZR88_RS12895 and ABZR88_RS12900 are separated by 233 nucleotidesABZR88_RS12900 and ABZR88_RS12905 are separated by 146 nucleotidesABZR88_RS12905 and ABZR88_RS12910 are separated by 22 nucleotides ABZR88_RS12890: ABZR88_RS12890 - TonB-dependent receptor, at 3,165,470 to 3,168,844 _RS12890 ABZR88_RS12895: ABZR88_RS12895 - FecR family protein, at 3,169,009 to 3,169,878 _RS12895 ABZR88_RS12900: ABZR88_RS12900 - RNA polymerase sigma factor, at 3,170,112 to 3,170,657 _RS12900 ABZR88_RS12905: ABZR88_RS12905 - fasciclin domain-containing protein, at 3,170,804 to 3,171,484 _RS12905 ABZR88_RS12910: ABZR88_RS12910 - RagB/SusD family nutrient uptake outer membrane protein, at 3,171,507 to 3,172,955 _RS12910
Group Condition ABZR88_RS12890 ABZR88_RS12895 ABZR88_RS12900 ABZR88_RS12905 ABZR88_RS12910
motility_chemotaxis R2A motility; outer cut -0.2 -1.6 -0.8 -0.1 +0.2
motility_chemotaxis R2A motility; outer cut -0.2 -0.6 -0.6 -0.2 -0.1
carbon source Pullulan (C) -0.3 -0.6 -0.1 -0.2 -0.0
temperature R2A 30C; 144 hours -0.2 -0.2 -0.4 -0.1 -0.1
stress R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM -0.2 -0.0 -0.7 -0.0 +0.0
carbon source Melibiose (C) -0.3 -0.4 -0.1 -0.0 -0.0
motility_chemotaxis R2A motility; outer cut -0.2 -0.1 -0.3 -0.2 -0.0
stress R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM -0.3 +0.4 -0.5 -0.3 -0.1
stress R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM -0.1 +0.4 -0.8 -0.1 -0.1
temperature R2A 30C -0.1 -0.3 -0.1 -0.1 +0.0
stress potassium fluoride stress 30 mM -0.1 -0.3 -0.1 -0.1 +0.0
no stress control R2A no stress control -0.3 +0.0 -0.1 -0.2 +0.0
stress R2A with Apigenin 50 ug/ml -0.2 +0.2 -0.2 -0.3 -0.0
stress R2A_low_K2HPO4 +0.1 -0.0 -0.3 -0.1 +0.1
stress copper (II) chloride stress 1 mM +0.1 -0.3 -0.2 +0.1 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days -0.1 -0.4 +0.3 +0.0 -0.0
carbon source L-Arabinose (C) -0.1 -0.3 +0.4 -0.1 -0.1
stress Kanamycin sulfate stress 0.05 mg/ml +0.0 -0.3 +0.2 -0.2 +0.0
temperature R2A 15C; 144 hours -0.1 +0.2 -0.2 -0.2 +0.0
carbon source D-Maltose (C) -0.1 -0.3 +0.5 -0.2 -0.1
carbon source Pullulan (C) -0.1 +0.1 +0.2 -0.2 -0.1
carbon source Pullulan (C) -0.0 -0.5 +0.5 +0.1 -0.1
temperature R2A 15C; 144 hours +0.1 +0.3 -0.2 -0.2 +0.0
carbon source Starch (C) +0.1 -0.2 +0.4 -0.1 -0.1
temperature R2A 15C; 72 hours -0.0 +0.1 +0.3 -0.2 +0.1
stress Trimethoprim stress 0.05 mg/ml +0.1 -0.3 +0.4 +0.1 +0.1
carbon source L-Rhamnose (C) +0.1 +0.5 -0.1 -0.1 -0.0
carbon source L-Arabinose (C) -0.2 +0.1 +0.3 +0.2 -0.1
motility_chemotaxis R2A motility; outer cut -0.1 -0.1 +0.5 +0.1 -0.0
carbon source L-Rhamnose (C) +0.0 +0.5 +0.1 +0.1 -0.1
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ABZR88_RS12890
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ABZR88_RS12895
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