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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS12540 and ABZR88_RS12545 are separated by 80 nucleotides
ABZR88_RS12545 and ABZR88_RS12550 are separated by 4 nucleotides
ABZR88_RS12550 and ABZR88_RS12555 are separated by 382 nucleotides
ABZR88_RS12555 and ABZR88_RS12560 are separated by 50 nucleotides
ABZR88_RS12540: ABZR88_RS12540 - efflux RND transporter periplasmic adaptor subunit, at 3,087,547 to 3,088,725
_RS12540
ABZR88_RS12545: ABZR88_RS12545 - efflux RND transporter permease subunit, at 3,088,806 to 3,091,994
_RS12545
ABZR88_RS12550: ABZR88_RS12550 - efflux transporter outer membrane subunit, at 3,091,999 to 3,093,411
_RS12550
ABZR88_RS12555: ABZR88_RS12555 - response regulator transcription factor, at 3,093,794 to 3,094,165
_RS12555
ABZR88_RS12560: ABZR88_RS12560 - glycosyltransferase family 2 protein, at 3,094,216 to 3,094,947
_RS12560
Group
Condition
ABZR88
_RS12540
ABZR88
_RS12545
ABZR88
_RS12550
ABZR88
_RS12555
ABZR88
_RS12560
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-1.5
-0.6
-0.5
+0.2
+0.3
stress
Erythromycin stress 0.05 mg/ml
-0.8
-0.8
-0.6
+0.1
+0.1
stress
Erythromycin stress 0.05 mg/ml
-0.9
-0.7
-0.5
+0.1
+0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.9
-0.4
-0.1
+0.2
+0.1
temperature
R2A 15C; 144 hours
-0.4
-0.4
-0.3
+0.1
+0.1
temperature
R2A 15C; 72 hours
-0.4
-0.2
-0.2
+0.0
+0.0
temperature
R2A 15C; 72 hours
-0.5
-0.3
-0.2
+0.1
+0.1
temperature
R2A 15C; 144 hours
-0.3
-0.3
-0.3
+0.1
-0.0
stress
Quercetin stress 0.05 mg/ml
-0.3
-0.2
-0.3
+0.1
+0.1
no stress control
R2A no stress control
+0.2
+0.0
-0.4
-0.3
-0.3
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.3
-0.4
-0.3
+0.1
+0.1
carbon source
L-Rhamnose (C)
-0.1
+0.2
+0.2
-1.2
+0.2
carbon source
L-Arabinose (C)
+0.1
-0.2
-0.1
-0.5
+0.0
stress
Trimethoprim stress 0.05 mg/ml
-0.1
-0.2
-0.3
-0.0
+0.1
stress
copper (II) chloride stress 1 mM
-0.3
-0.2
-0.1
-0.0
+0.2
temperature
R2A 30C
-0.2
-0.2
-0.1
+0.0
+0.1
carbon source
L-Arabinose (C)
-0.1
-0.0
-0.2
-0.3
+0.2
stress
R2A with Apigenin 50 ug/ml
-0.3
-0.2
-0.1
+0.2
+0.1
stress
Quercetin stress 0.05 mg/ml
-0.2
-0.2
-0.1
+0.0
+0.2
carbon source
L-Rhamnose (C)
+0.2
+0.2
+0.2
-1.1
+0.3
carbon source
D-Glucose (C)
-0.2
+0.1
-0.2
-0.1
+0.2
carbon source
Melibiose (C)
+0.1
-0.1
+0.1
-0.3
+0.1
stress
Kanamycin sulfate stress 0.05 mg/ml
-0.1
-0.1
-0.1
+0.1
+0.2
temperature
R2A 21C
-0.1
-0.1
-0.2
+0.2
+0.2
carbon source
Pullulan (C)
-0.1
-0.2
-0.1
+0.1
+0.3
carbon source
Starch (C)
-0.0
-0.1
-0.1
+0.4
+0.1
carbon source
D-Xylose (C)
+0.1
+0.1
+0.0
-0.2
+0.2
carbon source
D-Maltose (C)
-0.1
-0.0
-0.0
+0.3
+0.3
carbon source
alginate (C)
-0.0
-0.2
+0.1
+0.2
+0.3
carbon source
D-Xylose (C)
+0.2
+0.1
+0.1
-0.1
+0.2
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