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Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS11690 and ABZR88_RS11695 are separated by 147 nucleotides
ABZR88_RS11695 and ABZR88_RS11700 are separated by 1 nucleotides
ABZR88_RS11700 and ABZR88_RS11705 are separated by 243 nucleotides
ABZR88_RS11705 and ABZR88_RS11710 are separated by 128 nucleotides
ABZR88_RS11690: ABZR88_RS11690 - YXWGXW repeat-containing protein, at 2,877,347 to 2,877,649
_RS11690
ABZR88_RS11695: ABZR88_RS11695 - SGNH/GDSL hydrolase family protein, at 2,877,797 to 2,878,870
_RS11695
ABZR88_RS11700: ABZR88_RS11700 - SGNH/GDSL hydrolase family protein, at 2,878,872 to 2,879,954
_RS11700
ABZR88_RS11705: ABZR88_RS11705 - phosphoenolpyruvate synthase, at 2,880,198 to 2,882,642
_RS11705
ABZR88_RS11710: ABZR88_RS11710 - AraC family transcriptional regulator, at 2,882,771 to 2,883,664
_RS11710
Group
Condition
ABZR88
_RS11690
ABZR88
_RS11695
ABZR88
_RS11700
ABZR88
_RS11705
ABZR88
_RS11710
carbon source
Pullulan (C)
-0.7
+0.0
+0.1
-0.0
+0.0
stress
Erythromycin stress 0.05 mg/ml
-0.2
-0.1
-0.1
+0.0
-0.1
carbon source
L-Arabinose (C)
-0.1
-0.2
-0.2
+0.1
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.7
+0.2
+0.1
-0.0
+0.1
stress
copper (II) chloride stress 1 mM
-0.1
-0.1
-0.1
+0.0
+0.1
stress
NaCl stress 100 mM
-0.1
+0.0
-0.2
-0.0
+0.1
stress
Erythromycin stress 0.05 mg/ml
-0.2
-0.0
-0.1
-0.1
+0.1
carbon source
alginate (C)
-0.5
+0.2
+0.1
+0.1
+0.0
stress
R2A_low_K2HPO4
-0.1
+0.1
-0.1
+0.1
-0.0
temperature
R2A 37C
+0.1
-0.1
-0.1
+0.0
-0.0
stress
Kanamycin sulfate stress 0.05 mg/ml
+0.1
-0.1
-0.1
-0.1
+0.1
temperature
R2A 21C
-0.1
-0.1
-0.2
+0.1
+0.2
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.1
+0.2
-0.1
+0.1
carbon source
D-Maltose (C)
-0.1
-0.1
-0.1
+0.1
+0.2
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
+0.2
-0.1
-0.1
-0.1
+0.2
carbon source
D-Fructose (C)
+0.2
-0.0
-0.1
+0.1
-0.1
carbon source
D-Xylose (C)
+0.0
+0.2
-0.1
-0.0
+0.1
carbon source
alginate (C)
+0.1
+0.2
-0.2
+0.0
+0.0
carbon source
Beta-Lactose (C)
+0.3
+0.1
-0.2
+0.1
-0.1
no stress control
R2A no stress control
-0.0
+0.3
+0.1
-0.0
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.2
+0.1
-0.1
-0.1
+0.1
stress
Quercetin stress 0.05 mg/ml
+0.4
+0.0
-0.1
+0.0
-0.0
carbon source
L-Rhamnose (C)
+0.2
+0.3
+0.1
+0.0
-0.1
carbon source
D-Maltose (C)
+0.3
+0.1
-0.1
+0.1
+0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.6
-0.1
+0.0
-0.0
-0.1
temperature
R2A 15C; 144 hours
+0.1
+0.1
+0.1
-0.0
+0.2
stress
R2A_high_K2HPO4
+0.3
+0.1
-0.1
+0.1
+0.1
motility_chemotaxis
R2A motility; outer cut
+0.0
-0.2
+0.1
+0.4
+0.2
temperature
R2A 15C; 72 hours
+0.6
-0.0
+0.0
+0.0
-0.0
temperature
R2A 30C; 144 hours
+0.4
+0.1
+0.1
+0.1
+0.0
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