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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS11370 and ABZR88_RS11375 are separated by 662 nucleotides
ABZR88_RS11375 and ABZR88_RS11380 are separated by 12 nucleotides
ABZR88_RS11380 and ABZR88_RS11385 are separated by 126 nucleotides
ABZR88_RS11385 and ABZR88_RS11390 overlap by 8 nucleotides
ABZR88_RS11370: ABZR88_RS11370 - two-component regulator propeller domain-containing protein, at 2,797,754 to 2,802,121
_RS11370
ABZR88_RS11375: ABZR88_RS11375 - TonB-dependent receptor, at 2,802,784 to 2,805,795
_RS11375
ABZR88_RS11380: ABZR88_RS11380 - RagB/SusD family nutrient uptake outer membrane protein, at 2,805,808 to 2,807,622
_RS11380
ABZR88_RS11385: ABZR88_RS11385 - nuclear transport factor 2 family protein, at 2,807,749 to 2,808,105
_RS11385
ABZR88_RS11390: ABZR88_RS11390 - GNAT family N-acetyltransferase, at 2,808,098 to 2,808,706
_RS11390
Group
Condition
ABZR88
_RS11370
ABZR88
_RS11375
ABZR88
_RS11380
ABZR88
_RS11385
ABZR88
_RS11390
no stress control
R2A no stress control
-0.1
+0.0
+0.0
-0.7
+0.0
carbon source
Starch (C)
+0.0
+0.1
+0.0
-0.2
-0.6
carbon source
Pullulan (C)
+0.2
-0.0
-0.1
+0.1
-0.6
carbon source
L-Arabinose (C)
+0.1
-0.0
-0.0
-0.1
-0.4
carbon source
alginate (C)
+0.1
+0.1
+0.0
-0.3
-0.4
carbon source
Pullulan (C)
+0.0
+0.1
-0.2
-0.0
-0.3
carbon source
D-Maltose (C)
+0.1
+0.0
+0.0
-0.2
-0.3
carbon source
D-Maltose (C)
+0.1
+0.1
-0.2
-0.2
-0.2
motility_chemotaxis
R2A motility; outer cut
+0.1
-0.2
+0.1
-0.0
-0.3
stress
Esculin Monohydrate stress 5 mM
+0.0
+0.0
-0.1
-0.1
-0.3
carbon source
Pullulan (C)
+0.2
-0.0
-0.1
-0.1
-0.2
carbon source
L-Arabinose (C)
-0.1
+0.0
-0.1
+0.0
-0.2
temperature
R2A 15C; 144 hours
+0.2
-0.1
-0.1
-0.2
-0.2
carbon source
alginate (C)
+0.1
+0.0
-0.0
-0.0
-0.4
temperature
R2A 30C; 144 hours
+0.1
-0.1
+0.1
+0.0
-0.3
carbon source
Melibiose (C)
+0.2
+0.0
-0.2
+0.0
-0.2
carbon source
Beta-Lactose (C)
+0.1
+0.1
-0.1
+0.0
-0.3
temperature
R2A 15C; 144 hours
+0.1
+0.1
-0.1
-0.3
+0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
-0.1
+0.1
-0.1
-0.2
carbon source
D-Xylose (C)
+0.1
+0.0
+0.1
-0.2
-0.1
carbon source
Melibiose (C)
-0.0
+0.1
+0.2
+0.1
-0.4
carbon source
L-Rhamnose (C)
-0.0
+0.2
+0.0
-0.1
-0.1
carbon source
D-Xylose (C)
+0.0
-0.0
+0.1
-0.2
+0.2
carbon source
Beta-Lactose (C)
+0.1
+0.1
-0.1
+0.1
-0.0
motility_chemotaxis
R2A motility; outer cut
+0.2
-0.2
+0.2
+0.3
-0.3
stress
potassium fluoride stress 30 mM
+0.0
+0.0
+0.1
-0.1
+0.2
motility_chemotaxis
R2A motility; outer cut
+0.3
-0.1
+0.4
-0.4
+0.1
carbon source
D-Fructose (C)
-0.1
-0.0
+0.2
+0.2
+0.2
temperature
R2A 15C; 72 hours
+0.1
+0.1
+0.2
-0.0
+0.2
stress
Trimethoprim stress 0.05 mg/ml
+0.0
+0.1
+0.1
+0.5
-0.0
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