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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS10045 and ABZR88_RS10050 are separated by 321 nucleotides
ABZR88_RS10050 and ABZR88_RS10055 are separated by 85 nucleotides
ABZR88_RS10055 and ABZR88_RS10060 are separated by 80 nucleotides
ABZR88_RS10060 and ABZR88_RS10065 overlap by 4 nucleotides
ABZR88_RS10045: ABZR88_RS10045 - hypothetical protein, at 2,486,522 to 2,487,409
_RS10045
ABZR88_RS10050: ABZR88_RS10050 - sorbosone dehydrogenase family protein, at 2,487,731 to 2,489,011
_RS10050
ABZR88_RS10055: ABZR88_RS10055 - cytochrome c, at 2,489,097 to 2,489,537
_RS10055
ABZR88_RS10060: ABZR88_RS10060 - cytochrome-c peroxidase, at 2,489,618 to 2,490,784
_RS10060
ABZR88_RS10065: ABZR88_RS10065 - molybdopterin-dependent oxidoreductase, at 2,490,781 to 2,491,272
_RS10065
Group
Condition
ABZR88
_RS10045
ABZR88
_RS10050
ABZR88
_RS10055
ABZR88
_RS10060
ABZR88
_RS10065
no stress control
R2A no stress control
-0.0
-0.4
-0.5
-0.5
+0.3
stress
Erythromycin stress 0.05 mg/ml
+0.1
-0.2
-0.2
-0.1
-0.3
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.2
+0.0
-0.0
-0.0
-0.2
stress
Esculin Monohydrate stress 5 mM
-0.2
-0.1
+0.1
-0.0
-0.1
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
-0.2
+0.0
-0.1
+0.0
-0.1
carbon source
Pullulan (C)
-0.2
-0.1
-0.4
+0.2
+0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
-0.1
-0.2
-0.2
+0.0
motility_chemotaxis
R2A motility; outer cut
+0.1
-0.0
-0.1
-0.2
-0.1
carbon source
L-Rhamnose (C)
+0.1
-0.0
-0.2
-0.0
-0.1
carbon source
Starch (C)
-0.0
-0.2
-0.2
+0.0
+0.2
stress
Trimethoprim stress 0.05 mg/ml
-0.0
-0.0
+0.3
-0.1
-0.3
carbon source
D-Maltose (C)
-0.0
-0.0
-0.3
+0.2
+0.1
carbon source
alginate (C)
-0.2
+0.0
-0.3
+0.0
+0.3
carbon source
Pullulan (C)
-0.1
+0.0
-0.0
-0.1
+0.2
carbon source
Pullulan (C)
-0.1
-0.1
-0.1
+0.1
+0.3
motility_chemotaxis
R2A motility; outer cut
+0.3
-0.4
-0.1
+0.1
+0.1
carbon source
D-Fructose (C)
+0.1
-0.1
+0.2
-0.1
-0.0
carbon source
Pullulan (C)
+0.0
-0.2
+0.1
-0.2
+0.4
carbon source
Beta-Lactose (C)
-0.3
-0.0
+0.1
+0.1
+0.3
stress
R2A with Apigenin 50 ug/ml
+0.2
-0.2
+0.1
+0.0
+0.2
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
-0.3
+0.1
+0.0
+0.3
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.0
+0.0
+0.3
-0.1
+0.1
carbon source
Melibiose (C)
+0.1
-0.2
+0.3
+0.2
+0.0
carbon source
L-Rhamnose (C)
-0.2
-0.0
+0.3
+0.1
+0.2
temperature
R2A 15C; 144 hours
+0.0
-0.1
+0.3
+0.2
+0.2
temperature
R2A 15C; 72 hours
+0.0
+0.1
+0.3
+0.1
+0.0
motility_chemotaxis
R2A motility; outer cut
+0.2
-0.2
+0.5
+0.0
+0.2
motility_chemotaxis
R2A motility; outer cut
+0.1
+0.1
+0.4
+0.2
-0.1
temperature
R2A 15C; 72 hours
+0.2
+0.1
+0.5
-0.0
+0.1
temperature
R2A 30C; 144 hours
+0.1
+0.0
+0.3
+0.1
+0.3
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