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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS09270 and ABZR88_RS09275 are separated by 23 nucleotides
ABZR88_RS09275 and ABZR88_RS09280 are separated by 401 nucleotides
ABZR88_RS09280 and ABZR88_RS09285 are separated by 209 nucleotides
ABZR88_RS09285 and ABZR88_RS09290 are separated by 75 nucleotides
ABZR88_RS09270: ABZR88_RS09270 - STAS domain-containing protein, at 2,324,458 to 2,324,835
_RS09270
ABZR88_RS09275: ABZR88_RS09275 - ribonuclease Z, at 2,324,859 to 2,325,773
_RS09275
ABZR88_RS09280: ABZR88_RS09280 - glycoside hydrolase family 105 protein, at 2,326,175 to 2,327,566
_RS09280
ABZR88_RS09285: ABZR88_RS09285 - 5-(carboxyamino)imidazole ribonucleotide mutase, at 2,327,776 to 2,328,273
_RS09285
ABZR88_RS09290: ABZR88_RS09290 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 2,328,349 to 2,329,488
_RS09290
Group
Condition
ABZR88
_RS09270
ABZR88
_RS09275
ABZR88
_RS09280
ABZR88
_RS09285
ABZR88
_RS09290
no stress control
R2A no stress control
-0.5
-0.1
-0.9
N.D.
N.D.
carbon source
D-Glucose (C)
-0.8
-0.3
+0.1
N.D.
N.D.
carbon source
L-Arabinose (C)
+0.8
-1.5
-0.2
N.D.
N.D.
carbon source
D-Maltose (C)
-0.3
-0.4
-0.2
N.D.
N.D.
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.4
-0.3
N.D.
N.D.
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
-0.5
-0.3
+0.0
N.D.
N.D.
stress
Kanamycin sulfate stress 0.05 mg/ml
-0.5
-0.2
+0.0
N.D.
N.D.
temperature
R2A 15C; 72 hours
-0.6
+0.1
-0.2
N.D.
N.D.
carbon source
Beta-Lactose (C)
+0.0
-0.5
-0.2
N.D.
N.D.
carbon source
alginate (C)
-0.2
-0.1
-0.3
N.D.
N.D.
carbon source
D-Maltose (C)
-0.2
-0.3
-0.2
N.D.
N.D.
carbon source
L-Arabinose (C)
+1.3
-1.7
-0.1
N.D.
N.D.
carbon source
Beta-Lactose (C)
+0.1
-0.6
-0.1
N.D.
N.D.
stress
Erythromycin stress 0.05 mg/ml
-0.9
+0.3
+0.1
N.D.
N.D.
carbon source
D-Xylose (C)
+0.1
-0.6
+0.0
N.D.
N.D.
temperature
R2A 15C; 144 hours
-0.4
+0.3
-0.4
N.D.
N.D.
stress
copper (II) chloride stress 1 mM
-0.8
+0.5
-0.1
N.D.
N.D.
stress
Kanamycin sulfate stress 0.05 mg/ml
-0.4
-0.2
+0.1
N.D.
N.D.
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.3
+0.4
-0.5
N.D.
N.D.
carbon source
L-Rhamnose (C)
+0.9
-1.0
-0.2
N.D.
N.D.
stress
Erythromycin stress 0.05 mg/ml
-0.4
+0.2
+0.0
N.D.
N.D.
stress
copper (II) chloride stress 1 mM
-0.8
+0.6
+0.1
N.D.
N.D.
stress
Trimethoprim stress 0.05 mg/ml
-0.5
+0.3
+0.2
N.D.
N.D.
stress
potassium fluoride stress 30 mM
-0.5
+0.2
+0.3
N.D.
N.D.
carbon source
alginate (C)
+0.5
-0.3
-0.2
N.D.
N.D.
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.3
+0.6
-0.2
N.D.
N.D.
carbon source
Melibiose (C)
+0.4
-0.3
-0.1
N.D.
N.D.
carbon source
D-Xylose (C)
+0.7
-0.5
-0.0
N.D.
N.D.
carbon source
L-Rhamnose (C)
+1.0
-0.6
+0.1
N.D.
N.D.
motility_chemotaxis
R2A motility; outer cut
+1.5
-0.2
-0.1
N.D.
N.D.
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