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Protein
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Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS08215 and ABZR88_RS08220 are separated by 448 nucleotides
ABZR88_RS08220 and ABZR88_RS08225 are separated by 207 nucleotides
ABZR88_RS08225 and ABZR88_RS08230 are separated by 10 nucleotides
ABZR88_RS08230 and ABZR88_RS08235 are separated by 1198 nucleotides
ABZR88_RS08215: ABZR88_RS08215 - PAS domain-containing protein, at 2,042,808 to 2,046,404
_RS08215
ABZR88_RS08220: ABZR88_RS08220 - histone H1, at 2,046,853 to 2,047,032
_RS08220
ABZR88_RS08225: ABZR88_RS08225 - AraC family transcriptional regulator, at 2,047,240 to 2,048,082
_RS08225
ABZR88_RS08230: ABZR88_RS08230 - SDR family NAD(P)-dependent oxidoreductase, at 2,048,093 to 2,048,890
_RS08230
ABZR88_RS08235: ABZR88_RS08235 - SusC/RagA family TonB-linked outer membrane protein, at 2,050,089 to 2,053,325
_RS08235
Group
Condition
ABZR88
_RS08215
ABZR88
_RS08220
ABZR88
_RS08225
ABZR88
_RS08230
ABZR88
_RS08235
no stress control
R2A no stress control
+0.1
-0.1
-0.2
-1.0
-0.1
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.3
-0.3
-0.4
-0.0
stress
NaCl stress 100 mM
-0.0
-0.2
-0.2
-0.2
+0.0
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
-0.3
+0.2
-0.0
-0.4
-0.1
temperature
R2A 15C; 144 hours
-0.3
+0.2
-0.3
-0.1
-0.1
stress
copper (II) chloride stress 1 mM
-0.0
-0.1
-0.2
-0.2
-0.1
carbon source
Pullulan (C)
-0.3
+0.1
-0.2
-0.1
-0.0
motility_chemotaxis
R2A motility; outer cut
-0.4
-0.1
-0.6
+0.5
+0.0
carbon source
Beta-Lactose (C)
-0.3
+0.0
-0.4
+0.1
-0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.0
+0.4
-0.3
-0.4
-0.2
temperature
R2A 30C; 144 hours
-0.2
+0.1
+0.0
-0.2
-0.2
carbon source
D-Xylose (C)
+0.2
-0.1
-0.2
-0.1
+0.0
carbon source
alginate (C)
-0.2
+0.0
-0.3
+0.2
-0.0
temperature
R2A 15C; 72 hours
-0.0
+0.4
-0.1
-0.3
-0.2
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.1
+0.1
-0.3
+0.1
-0.0
temperature
R2A 30C
+0.0
+0.1
+0.0
-0.4
+0.0
carbon source
Starch (C)
-0.2
+0.2
-0.1
-0.0
-0.0
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.1
+0.2
-0.1
-0.0
-0.1
stress
Trimethoprim stress 0.05 mg/ml
+0.1
+0.0
-0.2
+0.1
-0.1
carbon source
L-Arabinose (C)
+0.5
-0.4
-0.2
+0.0
+0.0
carbon source
D-Maltose (C)
-0.1
+0.2
-0.3
+0.1
+0.0
stress
R2A with Apigenin 50 ug/ml
-0.2
+0.2
+0.0
+0.1
-0.1
carbon source
L-Rhamnose (C)
+0.4
-0.1
+0.0
-0.3
+0.0
carbon source
D-Xylose (C)
+0.4
-0.0
+0.1
-0.3
-0.0
carbon source
Pullulan (C)
+0.0
+0.0
-0.2
+0.3
+0.1
motility_chemotaxis
R2A motility; outer cut
-0.2
+0.0
-0.0
+0.4
-0.1
carbon source
Starch (C)
-0.0
+0.0
-0.1
+0.4
-0.0
carbon source
L-Rhamnose (C)
+0.6
-0.1
-0.1
-0.2
+0.1
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.2
+0.1
+0.6
+0.0
carbon source
L-Arabinose (C)
+0.8
-0.2
-0.2
+0.1
+0.0
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