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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS08080 and ABZR88_RS08085 are separated by 20 nucleotides
ABZR88_RS08085 and ABZR88_RS08090 are separated by 509 nucleotides
ABZR88_RS08090 and ABZR88_RS08095 are separated by 12 nucleotides
ABZR88_RS08095 and ABZR88_RS08100 are separated by 205 nucleotides
ABZR88_RS08080: ABZR88_RS08080 - RagB/SusD family nutrient uptake outer membrane protein, at 2,008,855 to 2,010,600
_RS08080
ABZR88_RS08085: ABZR88_RS08085 - SusC/RagA family TonB-linked outer membrane protein, at 2,010,621 to 2,013,686
_RS08085
ABZR88_RS08090: ABZR88_RS08090 - RagB/SusD family nutrient uptake outer membrane protein, at 2,014,196 to 2,016,040
_RS08090
ABZR88_RS08095: ABZR88_RS08095 - SusC/RagA family TonB-linked outer membrane protein, at 2,016,053 to 2,019,208
_RS08095
ABZR88_RS08100: ABZR88_RS08100 - family 43 glycosylhydrolase, at 2,019,414 to 2,020,415
_RS08100
Group
Condition
ABZR88
_RS08080
ABZR88
_RS08085
ABZR88
_RS08090
ABZR88
_RS08095
ABZR88
_RS08100
temperature
R2A 30C; 144 hours
-0.2
-0.1
-0.2
-0.1
-0.4
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
-0.2
-0.2
+0.0
-0.3
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.0
-0.1
-0.0
-0.1
-0.4
no stress control
R2A no stress control
+0.3
+0.1
-0.1
-0.1
-0.8
temperature
R2A 15C; 144 hours
+0.0
+0.0
+0.0
-0.1
-0.4
carbon source
Starch (C)
-0.0
+0.0
-0.0
-0.1
-0.3
carbon source
Beta-Lactose (C)
-0.2
+0.1
-0.2
-0.2
+0.2
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
-0.2
-0.0
-0.2
-0.0
-0.0
carbon source
D-Fructose (C)
-0.2
+0.0
+0.1
-0.0
-0.2
motility_chemotaxis
R2A motility; outer cut
-0.0
-0.1
+0.2
-0.0
-0.4
stress
potassium fluoride stress 30 mM
-0.1
-0.1
-0.1
+0.1
-0.1
motility_chemotaxis
R2A motility; outer cut
-0.1
+0.1
+0.2
-0.0
-0.4
temperature
R2A 37C
+0.0
+0.1
-0.0
-0.1
-0.2
carbon source
L-Arabinose (C)
+0.1
+0.0
-0.1
-0.0
-0.2
stress
Quercetin stress 0.05 mg/ml
-0.1
+0.1
-0.1
-0.0
-0.0
temperature
R2A 15C; 72 hours
-0.3
+0.1
-0.0
+0.2
-0.0
carbon source
Pullulan (C)
-0.2
+0.1
-0.0
-0.1
+0.0
carbon source
D-Glucose (C)
-0.1
-0.1
-0.1
-0.1
+0.2
carbon source
L-Arabinose (C)
+0.1
-0.1
-0.3
-0.0
+0.2
carbon source
alginate (C)
-0.2
+0.1
-0.1
-0.1
+0.2
motility_chemotaxis
R2A motility; outer cut
-0.0
+0.1
-0.1
+0.1
-0.1
carbon source
alginate (C)
+0.2
+0.1
-0.1
-0.1
-0.1
carbon source
Pullulan (C)
-0.2
+0.1
+0.2
-0.1
+0.1
carbon source
D-Maltose (C)
-0.1
+0.1
-0.1
-0.1
+0.2
carbon source
Pullulan (C)
+0.1
+0.2
+0.0
-0.0
-0.2
carbon source
Starch (C)
-0.1
+0.1
-0.1
+0.0
+0.1
carbon source
D-Maltose (C)
-0.2
+0.1
+0.1
+0.0
+0.0
motility_chemotaxis
R2A motility; outer cut
+0.0
+0.2
+0.1
-0.0
-0.2
carbon source
Melibiose (C)
+0.2
-0.1
+0.0
+0.0
+0.1
carbon source
Pullulan (C)
+0.1
+0.1
+0.1
+0.1
+0.2
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