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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS08030 and ABZR88_RS08035 are separated by 1149 nucleotides
ABZR88_RS08035 and ABZR88_RS08040 are separated by 287 nucleotides
ABZR88_RS08040 and ABZR88_RS08045 are separated by 71 nucleotides
ABZR88_RS08045 and ABZR88_RS08050 are separated by 268 nucleotides
ABZR88_RS08030: ABZR88_RS08030 - helix-turn-helix domain-containing protein, at 1,989,114 to 1,989,377
_RS08030
ABZR88_RS08035: ABZR88_RS08035 - beta-galactosidase, at 1,990,527 to 1,992,944
_RS08035
ABZR88_RS08040: ABZR88_RS08040 - glycosyl hydrolase family 28 protein, at 1,993,232 to 1,994,593
_RS08040
ABZR88_RS08045: ABZR88_RS08045 - family 43 glycosylhydrolase, at 1,994,665 to 1,995,660
_RS08045
ABZR88_RS08050: ABZR88_RS08050 - family 43 glycosylhydrolase, at 1,995,929 to 1,998,373
_RS08050
Group
Condition
ABZR88
_RS08030
ABZR88
_RS08035
ABZR88
_RS08040
ABZR88
_RS08045
ABZR88
_RS08050
no stress control
R2A no stress control
-0.8
-0.1
+0.1
-0.3
+0.0
carbon source
D-Glucose (C)
-0.5
+0.0
-0.0
-0.1
+0.1
stress
Kanamycin sulfate stress 0.05 mg/ml
-0.3
+0.0
+0.1
-0.2
-0.1
carbon source
Pullulan (C)
-0.4
+0.1
+0.0
+0.0
+0.0
stress
Erythromycin stress 0.05 mg/ml
-0.1
+0.1
+0.1
-0.2
-0.1
carbon source
L-Rhamnose (C)
-0.2
-0.1
+0.4
-0.1
-0.1
carbon source
D-Glucose (C)
+0.4
+0.0
-0.0
-0.3
-0.1
carbon source
Beta-Lactose (C)
+0.3
+0.1
-0.1
-0.3
+0.0
temperature
R2A 15C; 144 hours
-0.2
+0.2
+0.1
-0.1
+0.1
carbon source
L-Arabinose (C)
-0.2
+0.1
-0.1
+0.3
+0.0
carbon source
Melibiose (C)
+0.4
+0.0
+0.1
-0.4
+0.0
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
+0.3
-0.1
+0.1
-0.1
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.4
+0.1
-0.1
-0.1
-0.0
stress
R2A_high_K2HPO4
+0.2
+0.1
+0.1
-0.1
-0.0
carbon source
Starch (C)
+0.2
+0.1
-0.0
-0.1
+0.1
carbon source
D-Maltose (C)
+0.2
+0.2
-0.1
-0.0
+0.0
carbon source
Pullulan (C)
+0.3
+0.2
-0.0
+0.0
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.2
+0.1
+0.3
-0.1
-0.1
carbon source
D-Xylose (C)
+0.3
+0.1
+0.1
-0.0
-0.1
temperature
R2A 15C; 144 hours
-0.1
+0.2
+0.0
+0.2
+0.1
temperature
R2A 15C; 72 hours
+0.0
+0.2
+0.1
-0.1
+0.1
stress
R2A_high_K2HPO4
+0.4
+0.0
+0.1
-0.2
+0.1
stress
potassium fluoride stress 30 mM
+0.4
+0.1
+0.1
-0.0
-0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.2
+0.1
+0.1
+0.0
+0.0
stress
Erythromycin stress 0.05 mg/ml
+0.6
+0.1
+0.1
-0.2
-0.1
carbon source
L-Arabinose (C)
+0.1
+0.1
+0.2
+0.2
+0.0
temperature
R2A 15C; 72 hours
+0.4
+0.1
+0.0
-0.0
+0.2
carbon source
L-Rhamnose (C)
+0.4
-0.0
+0.2
+0.1
+0.1
motility_chemotaxis
R2A motility; outer cut
+0.5
+0.1
-0.0
+0.3
-0.0
motility_chemotaxis
R2A motility; outer cut
+0.7
+0.2
+0.1
+0.1
-0.1
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ABZR88_RS08040
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