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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS07230 and ABZR88_RS07235 are separated by 5 nucleotides
ABZR88_RS07235 and ABZR88_RS07240 are separated by 373 nucleotides
ABZR88_RS07240 and ABZR88_RS07245 are separated by 7 nucleotides
ABZR88_RS07245 and ABZR88_RS07250 are separated by 29 nucleotides
ABZR88_RS07230: ABZR88_RS07230 - alpha/beta hydrolase, at 1,785,761 to 1,786,690
_RS07230
ABZR88_RS07235: ABZR88_RS07235 - sialate O-acetylesterase, at 1,786,696 to 1,788,093
_RS07235
ABZR88_RS07240: ABZR88_RS07240 - SusC/RagA family TonB-linked outer membrane protein, at 1,788,467 to 1,791,289
_RS07240
ABZR88_RS07245: ABZR88_RS07245 - RagB/SusD family nutrient uptake outer membrane protein, at 1,791,297 to 1,792,991
_RS07245
ABZR88_RS07250: ABZR88_RS07250 - TonB-dependent receptor, at 1,793,021 to 1,796,122
_RS07250
Group
Condition
ABZR88
_RS07230
ABZR88
_RS07235
ABZR88
_RS07240
ABZR88
_RS07245
ABZR88
_RS07250
no stress control
R2A no stress control
-0.5
-0.1
-0.1
-0.1
-0.1
temperature
R2A 30C; 144 hours
-0.1
-0.3
-0.2
-0.3
-0.0
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.3
-0.1
-0.2
+0.0
+0.0
stress
Erythromycin stress 0.05 mg/ml
+0.0
-0.0
-0.2
-0.1
+0.0
carbon source
alginate (C)
-0.3
+0.0
+0.0
-0.0
+0.1
temperature
R2A 30C
-0.2
+0.0
-0.0
-0.1
+0.1
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
-0.1
+0.0
-0.1
-0.0
+0.1
carbon source
Pullulan (C)
-0.2
+0.1
-0.1
-0.1
+0.1
temperature
R2A 15C; 144 hours
-0.2
-0.0
+0.0
-0.0
+0.1
carbon source
L-Rhamnose (C)
-0.4
+0.2
+0.1
+0.0
+0.0
stress
Trimethoprim stress 0.05 mg/ml
-0.3
-0.0
+0.1
+0.0
+0.1
carbon source
Pullulan (C)
+0.1
+0.2
-0.1
-0.1
-0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.2
+0.1
+0.0
-0.0
+0.0
carbon source
Starch (C)
-0.2
+0.1
+0.0
+0.0
+0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.0
+0.1
+0.1
-0.2
+0.0
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
+0.1
+0.1
-0.1
-0.1
+0.0
stress
Erythromycin stress 0.05 mg/ml
+0.1
+0.1
-0.1
+0.0
+0.0
carbon source
Melibiose (C)
-0.1
+0.2
+0.0
+0.0
-0.1
stress
R2A_high_K2HPO4
+0.0
+0.1
-0.1
+0.1
+0.1
carbon source
alginate (C)
+0.1
+0.1
-0.0
+0.0
+0.1
carbon source
Starch (C)
-0.0
+0.2
+0.1
-0.0
+0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.1
+0.2
+0.1
-0.0
+0.2
stress
potassium fluoride stress 30 mM
+0.2
+0.1
-0.1
+0.1
-0.0
motility_chemotaxis
R2A motility; outer cut
-0.3
+0.3
+0.5
-0.2
+0.1
motility_chemotaxis
R2A motility; outer cut
+0.1
+0.1
+0.1
+0.1
-0.0
stress
copper (II) chloride stress 1 mM
+0.1
+0.1
+0.0
+0.0
+0.1
temperature
R2A 15C; 144 hours
+0.2
+0.0
+0.1
+0.1
+0.1
temperature
R2A 15C; 72 hours
+0.3
+0.2
+0.1
-0.1
+0.2
motility_chemotaxis
R2A motility; outer cut
+0.5
+0.1
+0.1
-0.0
+0.1
motility_chemotaxis
R2A motility; outer cut
+0.6
+0.1
+0.1
+0.2
+0.2
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ABZR88_RS07240
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