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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS07200 and ABZR88_RS07205 are separated by 8 nucleotides
ABZR88_RS07205 and ABZR88_RS07210 are separated by 24 nucleotides
ABZR88_RS07210 and ABZR88_RS07215 are separated by 6 nucleotides
ABZR88_RS07215 and ABZR88_RS07220 are separated by 168 nucleotides
ABZR88_RS07200: ABZR88_RS07200 - glycoside hydrolase family 3 N-terminal domain-containing protein, at 1,773,818 to 1,776,037
_RS07200
ABZR88_RS07205: ABZR88_RS07205 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 1,776,046 to 1,778,376
_RS07205
ABZR88_RS07210: ABZR88_RS07210 - alpha-galactosidase, at 1,778,401 to 1,780,563
_RS07210
ABZR88_RS07215: ABZR88_RS07215 - LacI family DNA-binding transcriptional regulator, at 1,780,570 to 1,781,595
_RS07215
ABZR88_RS07220: ABZR88_RS07220 - FAD-dependent oxidoreductase, at 1,781,764 to 1,784,058
_RS07220
Group
Condition
ABZR88
_RS07200
ABZR88
_RS07205
ABZR88
_RS07210
ABZR88
_RS07215
ABZR88
_RS07220
temperature
R2A 30C; 144 hours
-0.2
-0.1
-0.2
-0.2
-0.2
carbon source
alginate (C)
-0.2
+0.1
-0.1
-0.3
-0.1
carbon source
Starch (C)
+0.1
-0.2
-0.1
-0.3
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.2
+0.0
+0.0
-0.4
-0.2
carbon source
Starch (C)
+0.0
+0.0
-0.1
-0.3
-0.1
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
+0.0
-0.1
-0.1
-0.2
-0.1
no stress control
R2A no stress control
+0.0
+0.0
-0.2
-0.2
-0.0
stress
R2A_low_K2HPO4
-0.1
+0.0
+0.0
-0.2
-0.1
carbon source
D-Fructose (C)
+0.1
+0.0
-0.0
-0.2
-0.1
stress
copper (II) chloride stress 1 mM
+0.0
+0.1
-0.0
-0.2
-0.1
carbon source
alginate (C)
-0.0
+0.1
-0.0
-0.3
+0.1
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
+0.0
+0.1
-0.0
-0.1
-0.1
motility_chemotaxis
R2A motility; outer cut
-0.0
+0.2
+0.0
-0.2
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.0
+0.1
-0.0
-0.2
+0.0
stress
R2A with Apigenin 50 ug/ml
+0.0
+0.1
-0.2
-0.1
-0.0
carbon source
Beta-Lactose (C)
+0.0
+0.0
+0.0
-0.3
+0.0
temperature
R2A 30C
+0.1
+0.1
-0.0
-0.2
-0.1
carbon source
D-Glucose (C)
+0.1
+0.0
+0.0
-0.2
-0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.0
+0.1
-0.1
+0.1
-0.1
carbon source
Pullulan (C)
-0.2
-0.0
-0.0
+0.1
-0.1
temperature
R2A 37C
+0.0
+0.0
-0.1
+0.1
-0.1
temperature
R2A 15C; 72 hours
+0.2
+0.1
+0.1
-0.1
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.2
+0.1
+0.2
-0.3
-0.0
carbon source
Pullulan (C)
+0.1
+0.1
+0.1
-0.1
+0.1
carbon source
L-Rhamnose (C)
+0.2
+0.0
+0.2
-0.1
-0.0
stress
Trimethoprim stress 0.05 mg/ml
+0.0
+0.0
+0.1
+0.2
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
+0.1
-0.1
+0.3
-0.0
motility_chemotaxis
R2A motility; outer cut
+0.2
+0.3
-0.1
+0.2
-0.1
carbon source
Melibiose (C)
+7.3
+5.4
-0.4
-0.3
-0.0
carbon source
Melibiose (C)
+7.4
+5.4
-0.4
-0.0
-0.0
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