Fitness for 5 genes in Mucilaginibacter yixingensis YX-36 DSM 26809

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500 ntABZR88_RS06030 and ABZR88_RS06035 are separated by 14 nucleotidesABZR88_RS06035 and ABZR88_RS06040 are separated by 23 nucleotidesABZR88_RS06040 and ABZR88_RS06045 are separated by 163 nucleotidesABZR88_RS06045 and ABZR88_RS06050 are separated by 6 nucleotides ABZR88_RS06030: ABZR88_RS06030 - fasciclin domain-containing protein, at 1,473,494 to 1,475,068 _RS06030 ABZR88_RS06035: ABZR88_RS06035 - SusC/RagA family TonB-linked outer membrane protein, at 1,475,083 to 1,478,313 _RS06035 ABZR88_RS06040: ABZR88_RS06040 - RagB/SusD family nutrient uptake outer membrane protein, at 1,478,337 to 1,480,109 _RS06040 ABZR88_RS06045: ABZR88_RS06045 - HopJ type III effector protein, at 1,480,273 to 1,480,614 _RS06045 ABZR88_RS06050: ABZR88_RS06050 - sensor histidine kinase KdpD, at 1,480,621 to 1,481,937 _RS06050
Group Condition ABZR88_RS06030 ABZR88_RS06035 ABZR88_RS06040 ABZR88_RS06045 ABZR88_RS06050
no stress control R2A no stress control -0.3 -0.4 -0.4 +0.2 -0.3
stress Quercetin stress 0.05 mg/ml -0.0 -0.1 -0.0 -0.6 -0.1
carbon source Pullulan (C) +0.1 +0.0 -0.0 -0.7 -0.1
carbon source Starch (C) +0.0 -0.1 -0.1 -0.3 -0.2
stress R2A_low_K2HPO4 -0.1 +0.0 -0.1 -0.4 -0.1
carbon source L-Rhamnose (C) -0.1 -0.1 -0.2 -0.3 +0.1
temperature R2A 30C -0.1 -0.0 -0.0 -0.3 -0.2
carbon source D-Fructose (C) -0.0 -0.0 +0.0 -0.5 +0.0
carbon source Beta-Lactose (C) +0.1 -0.1 +0.0 -0.4 -0.2
temperature R2A 15C; 72 hours +0.1 -0.0 -0.1 -0.3 -0.1
carbon source alginate (C) +0.0 -0.1 -0.0 -0.5 +0.2
carbon source D-Maltose (C) +0.1 -0.1 -0.1 -0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days +0.0 +0.1 -0.1 -0.3 -0.1
stress Kanamycin sulfate stress 0.05 mg/ml -0.1 -0.1 -0.0 -0.2 +0.1
carbon source alginate (C) +0.1 -0.1 +0.1 -0.4 +0.0
carbon source Starch (C) +0.1 -0.1 +0.0 -0.3 +0.1
carbon source Beta-Lactose (C) +0.1 +0.0 +0.0 -0.4 +0.0
carbon source D-Maltose (C) +0.2 -0.0 +0.2 -0.5 -0.1
temperature R2A 15C; 144 hours +0.1 +0.1 -0.0 -0.4 +0.2
motility_chemotaxis R2A motility; outer cut -0.1 +0.1 +0.0 -0.6 +0.5
carbon source Pullulan (C) -0.1 -0.1 -0.1 +0.2 +0.1
motility_chemotaxis R2A motility; outer cut -0.0 -0.1 +0.2 -0.5 +0.3
stress R2A_low_K2HPO4 -0.1 -0.1 -0.1 +0.3 -0.0
motility_chemotaxis R2A motility; outer cut -0.3 -0.0 +0.4 +0.1 -0.2
motility_chemotaxis R2A motility; outer cut -0.1 +0.0 -0.2 +0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days -0.1 -0.1 +0.1 +0.4 +0.1
temperature R2A 15C; 144 hours -0.0 +0.0 -0.1 +0.3 +0.1
carbon source D-Xylose (C) -0.0 +0.0 -0.0 +0.3 +0.2
stress potassium fluoride stress 30 mM +0.0 +0.0 +0.0 +0.5 +0.0
stress Erythromycin stress 0.05 mg/ml -0.1 +0.1 -0.0 +0.5 +0.1
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