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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS06015 and ABZR88_RS06020 are separated by 10 nucleotides
ABZR88_RS06020 and ABZR88_RS06025 are separated by 20 nucleotides
ABZR88_RS06025 and ABZR88_RS06030 are separated by 42 nucleotides
ABZR88_RS06030 and ABZR88_RS06035 are separated by 14 nucleotides
ABZR88_RS06015: ABZR88_RS06015 - SusC/RagA family TonB-linked outer membrane protein, at 1,466,894 to 1,470,184
_RS06015
ABZR88_RS06020: ABZR88_RS06020 - RagB/SusD family nutrient uptake outer membrane protein, at 1,470,195 to 1,471,697
_RS06020
ABZR88_RS06025: ABZR88_RS06025 - fasciclin domain-containing protein, at 1,471,718 to 1,473,451
_RS06025
ABZR88_RS06030: ABZR88_RS06030 - fasciclin domain-containing protein, at 1,473,494 to 1,475,068
_RS06030
ABZR88_RS06035: ABZR88_RS06035 - SusC/RagA family TonB-linked outer membrane protein, at 1,475,083 to 1,478,313
_RS06035
Group
Condition
ABZR88
_RS06015
ABZR88
_RS06020
ABZR88
_RS06025
ABZR88
_RS06030
ABZR88
_RS06035
no stress control
R2A no stress control
-0.1
-0.0
-0.2
-0.3
-0.4
stress
potassium fluoride stress 30 mM
-0.1
-0.1
-0.2
-0.1
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.0
-0.2
-0.2
-0.1
-0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.1
-0.1
-0.1
-0.0
-0.1
stress
Kanamycin sulfate stress 0.05 mg/ml
-0.0
-0.2
-0.1
-0.1
-0.0
stress
Quercetin stress 0.05 mg/ml
-0.1
-0.1
-0.0
-0.0
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.0
-0.2
-0.2
-0.1
+0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
-0.1
-0.2
-0.1
-0.0
stress
Erythromycin stress 0.05 mg/ml
-0.0
-0.1
-0.2
-0.1
+0.1
carbon source
alginate (C)
-0.1
-0.0
-0.1
+0.0
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.1
-0.1
+0.1
-0.3
-0.0
carbon source
Pullulan (C)
-0.1
-0.1
-0.1
+0.2
-0.1
carbon source
L-Rhamnose (C)
+0.0
+0.0
+0.1
-0.1
-0.1
carbon source
Starch (C)
-0.0
-0.1
-0.0
+0.1
-0.1
carbon source
alginate (C)
-0.0
+0.0
-0.1
+0.1
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.1
+0.0
-0.1
-0.0
-0.1
carbon source
Beta-Lactose (C)
-0.0
-0.0
+0.0
+0.1
-0.1
carbon source
Pullulan (C)
+0.1
+0.1
+0.0
-0.1
-0.1
carbon source
D-Maltose (C)
+0.0
+0.0
-0.1
+0.1
-0.1
carbon source
L-Arabinose (C)
+0.0
-0.1
-0.1
+0.1
-0.0
stress
R2A_high_K2HPO4
+0.0
+0.1
-0.1
-0.0
-0.0
motility_chemotaxis
R2A motility; outer cut
-0.0
-0.2
+0.3
-0.1
+0.0
carbon source
L-Rhamnose (C)
-0.0
+0.3
-0.0
-0.1
-0.0
carbon source
D-Fructose (C)
-0.0
+0.1
+0.1
+0.0
-0.0
carbon source
D-Maltose (C)
-0.0
-0.0
+0.0
+0.2
-0.0
carbon source
Pullulan (C)
+0.1
-0.1
+0.0
+0.1
+0.0
temperature
R2A 37C
+0.0
+0.2
+0.1
-0.0
-0.0
carbon source
Melibiose (C)
+0.1
+0.1
+0.1
-0.0
+0.0
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
-0.0
+0.1
+0.2
+0.0
+0.1
carbon source
D-Xylose (C)
+0.1
+0.1
+0.0
-0.0
+0.0
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