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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS05835 and ABZR88_RS05840 are separated by 172 nucleotides
ABZR88_RS05840 and ABZR88_RS05845 are separated by 18 nucleotides
ABZR88_RS05845 and ABZR88_RS05850 are separated by 149 nucleotides
ABZR88_RS05850 and ABZR88_RS05855 are separated by 179 nucleotides
ABZR88_RS05835: ABZR88_RS05835 - DUF4397 domain-containing protein, at 1,424,434 to 1,425,378
_RS05835
ABZR88_RS05840: ABZR88_RS05840 - aldehyde reductase, at 1,425,551 to 1,426,600
_RS05840
ABZR88_RS05845: ABZR88_RS05845 - AraC family transcriptional regulator, at 1,426,619 to 1,427,404
_RS05845
ABZR88_RS05850: ABZR88_RS05850 - nucleoside hydrolase-like domain-containing protein, at 1,427,554 to 1,428,846
_RS05850
ABZR88_RS05855: ABZR88_RS05855 - hypothetical protein, at 1,429,026 to 1,429,403
_RS05855
Group
Condition
ABZR88
_RS05835
ABZR88
_RS05840
ABZR88
_RS05845
ABZR88
_RS05850
ABZR88
_RS05855
temperature
R2A 15C; 72 hours
-0.2
-0.1
-0.4
+0.0
-0.3
carbon source
L-Rhamnose (C)
-0.3
-0.1
-0.3
-0.1
-0.0
motility_chemotaxis
R2A motility; outer cut
-0.1
+0.1
-0.2
-0.1
-0.3
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.2
-0.1
-0.4
-0.1
+0.0
carbon source
L-Arabinose (C)
-0.2
+0.1
-0.6
-0.1
+0.1
temperature
R2A 15C; 144 hours
-0.2
-0.1
-0.1
+0.1
-0.3
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.3
+0.0
+0.0
+0.0
-0.2
carbon source
D-Xylose (C)
-0.1
-0.1
+0.1
+0.0
-0.2
stress
Quercetin stress 0.05 mg/ml
-0.0
+0.2
-0.1
-0.1
-0.2
temperature
R2A 15C; 72 hours
-0.3
-0.1
-0.2
+0.1
+0.3
carbon source
alginate (C)
-0.2
+0.0
-0.2
+0.1
-0.0
carbon source
D-Fructose (C)
+0.2
-0.1
-0.5
+0.1
+0.1
stress
Trimethoprim stress 0.05 mg/ml
+0.2
+0.1
-0.4
-0.1
+0.1
carbon source
L-Arabinose (C)
-0.3
+0.2
+0.0
-0.1
+0.1
carbon source
Starch (C)
-0.2
-0.1
-0.0
+0.0
+0.2
temperature
R2A 15C; 144 hours
-0.1
-0.0
-0.2
+0.1
+0.2
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
-0.2
+0.1
+0.1
+0.1
-0.2
carbon source
Pullulan (C)
-0.2
-0.2
+0.4
-0.0
+0.1
carbon source
Pullulan (C)
+0.0
+0.2
-0.2
+0.0
-0.1
carbon source
Melibiose (C)
-0.1
+0.0
+0.3
-0.1
-0.0
carbon source
Melibiose (C)
-0.2
-0.1
+0.2
+0.1
+0.1
motility_chemotaxis
R2A motility; outer cut
+0.0
+0.1
-0.2
+0.1
+0.2
carbon source
alginate (C)
-0.1
-0.1
+0.1
+0.1
+0.2
stress
Erythromycin stress 0.05 mg/ml
+0.0
+0.1
-0.1
+0.3
-0.2
carbon source
Beta-Lactose (C)
-0.2
-0.0
+0.1
+0.1
+0.3
carbon source
Pullulan (C)
-0.1
+0.0
-0.1
+0.1
+0.3
carbon source
L-Rhamnose (C)
-0.0
-0.1
+0.3
+0.2
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.1
+0.1
+0.2
+0.1
-0.2
stress
R2A with Apigenin 50 ug/ml
-0.1
+0.1
+0.4
+0.0
-0.1
carbon source
Beta-Lactose (C)
-0.2
+0.2
+0.3
+0.2
+0.3
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