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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS04335 and ABZR88_RS04340 are separated by 34 nucleotides
ABZR88_RS04340 and ABZR88_RS04345 are separated by 23 nucleotides
ABZR88_RS04345 and ABZR88_RS04350 are separated by 147 nucleotides
ABZR88_RS04350 and ABZR88_RS04355 are separated by 231 nucleotides
ABZR88_RS04335: ABZR88_RS04335 - TolC family protein, at 1,034,685 to 1,036,061
_RS04335
ABZR88_RS04340: ABZR88_RS04340 - efflux RND transporter periplasmic adaptor subunit, at 1,036,096 to 1,037,214
_RS04340
ABZR88_RS04345: ABZR88_RS04345 - efflux RND transporter permease subunit, at 1,037,238 to 1,040,654
_RS04345
ABZR88_RS04350: ABZR88_RS04350 - alpha/beta fold hydrolase, at 1,040,802 to 1,041,677
_RS04350
ABZR88_RS04355: ABZR88_RS04355 - ABC transporter ATP-binding protein, at 1,041,909 to 1,043,570
_RS04355
Group
Condition
ABZR88
_RS04335
ABZR88
_RS04340
ABZR88
_RS04345
ABZR88
_RS04350
ABZR88
_RS04355
stress
Erythromycin stress 0.05 mg/ml
-2.4
-2.3
-2.2
-0.0
+0.1
stress
Erythromycin stress 0.05 mg/ml
-2.2
-2.2
-2.0
-0.0
-0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.8
-1.2
-0.7
+0.1
-0.2
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.9
-0.9
-0.6
+0.0
+0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.8
-0.9
-0.8
-0.0
+0.2
carbon source
alginate (C)
-0.4
-0.5
-0.7
-0.1
-0.1
carbon source
alginate (C)
-0.2
-0.4
-0.5
+0.1
+0.1
temperature
R2A 30C; 144 hours
+0.1
-0.1
+0.3
-0.3
-0.4
no stress control
R2A no stress control
+0.1
+0.0
+0.5
-0.1
-0.4
carbon source
L-Arabinose (C)
+0.2
+0.4
+0.3
-0.1
-0.1
carbon source
Starch (C)
+0.3
+0.4
+0.3
-0.1
-0.3
motility_chemotaxis
R2A motility; outer cut
+0.1
+0.3
+0.4
-0.2
+0.2
motility_chemotaxis
R2A motility; outer cut
+0.3
+0.3
+0.5
-0.1
-0.2
stress
Esculin Monohydrate stress 5 mM
+0.2
+0.5
+0.4
+0.0
-0.1
carbon source
Pullulan (C)
+0.3
+0.2
+0.4
-0.1
+0.1
carbon source
D-Xylose (C)
+0.4
+0.3
+0.4
-0.0
-0.0
carbon source
Pullulan (C)
+0.2
+0.6
+0.3
+0.1
-0.1
stress
Kanamycin sulfate stress 0.05 mg/ml
+0.4
+0.4
+0.4
+0.1
-0.2
carbon source
L-Rhamnose (C)
+0.3
+0.4
+0.5
+0.0
-0.2
stress
Kanamycin sulfate stress 0.05 mg/ml
+0.3
+0.5
+0.5
+0.1
-0.2
carbon source
D-Xylose (C)
+0.4
+0.4
+0.3
+0.1
-0.0
stress
copper (II) chloride stress 1 mM
+0.1
+0.4
+0.3
+0.2
+0.1
motility_chemotaxis
R2A motility; outer cut
+0.3
+0.2
+0.5
+0.2
+0.1
stress
Trimethoprim stress 0.05 mg/ml
+0.2
+0.4
+0.1
+0.7
-0.0
carbon source
Pullulan (C)
+0.3
+0.3
+0.3
+0.2
+0.1
temperature
R2A 15C; 144 hours
+0.6
+0.5
+0.5
-0.0
-0.2
carbon source
Pullulan (C)
+0.5
+0.4
+0.3
+0.1
+0.1
temperature
R2A 15C; 144 hours
+0.6
+0.5
+0.6
+0.0
-0.1
temperature
R2A 15C; 72 hours
+0.5
+0.6
+0.8
-0.1
-0.0
temperature
R2A 15C; 72 hours
+0.5
+0.7
+0.6
-0.1
+0.0
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