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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS03795 and ABZR88_RS03800 are separated by 3 nucleotides
ABZR88_RS03800 and ABZR88_RS03805 are separated by 4 nucleotides
ABZR88_RS03805 and ABZR88_RS03810 are separated by 75 nucleotides
ABZR88_RS03810 and ABZR88_RS03815 are separated by 68 nucleotides
ABZR88_RS03795: ABZR88_RS03795 - hypothetical protein, at 902,579 to 902,788
_RS03795
ABZR88_RS03800: ABZR88_RS03800 - RES family NAD+ phosphorylase, at 902,792 to 903,250
_RS03800
ABZR88_RS03805: ABZR88_RS03805 - antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein, at 903,255 to 903,749
_RS03805
ABZR88_RS03810: ABZR88_RS03810 - valine--tRNA ligase, at 903,825 to 906,473
_RS03810
ABZR88_RS03815: ABZR88_RS03815 - ATP-binding protein, at 906,542 to 908,347
_RS03815
Group
Condition
ABZR88
_RS03795
ABZR88
_RS03800
ABZR88
_RS03805
ABZR88
_RS03810
ABZR88
_RS03815
carbon source
L-Rhamnose (C)
-0.6
+0.1
N.D.
N.D.
-0.1
carbon source
D-Xylose (C)
-0.5
+0.1
N.D.
N.D.
-0.2
carbon source
Melibiose (C)
-0.3
+0.0
N.D.
N.D.
-0.2
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.6
+0.2
N.D.
N.D.
-0.0
carbon source
D-Glucose (C)
-0.4
+0.2
N.D.
N.D.
-0.1
carbon source
D-Fructose (C)
+0.2
-0.3
N.D.
N.D.
-0.0
temperature
R2A 30C
-0.2
+0.2
N.D.
N.D.
-0.1
no stress control
R2A no stress control
+0.1
+0.2
N.D.
N.D.
-0.4
temperature
R2A 30C; 144 hours
-0.3
+0.3
N.D.
N.D.
+0.1
stress
Kanamycin sulfate stress 0.05 mg/ml
+0.2
+0.1
N.D.
N.D.
-0.2
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.1
+0.4
N.D.
N.D.
-0.1
stress
Erythromycin stress 0.05 mg/ml
-0.1
+0.5
N.D.
N.D.
-0.1
stress
potassium fluoride stress 30 mM
+0.4
-0.1
N.D.
N.D.
-0.1
stress
Quercetin stress 0.05 mg/ml
+0.3
+0.1
N.D.
N.D.
-0.1
temperature
R2A 37C
+0.2
+0.2
N.D.
N.D.
-0.1
carbon source
D-Maltose (C)
+0.1
+0.3
N.D.
N.D.
-0.1
stress
Esculin Monohydrate stress 5 mM
+0.3
+0.2
N.D.
N.D.
-0.1
carbon source
Melibiose (C)
+0.3
+0.3
N.D.
N.D.
-0.2
carbon source
alginate (C)
+0.5
+0.0
N.D.
N.D.
-0.1
temperature
R2A 15C; 72 hours
+0.6
-0.0
N.D.
N.D.
-0.1
temperature
R2A 15C; 72 hours
+0.5
+0.2
N.D.
N.D.
-0.1
carbon source
Starch (C)
+0.2
+0.2
N.D.
N.D.
+0.2
carbon source
alginate (C)
+0.6
+0.1
N.D.
N.D.
-0.1
carbon source
Pullulan (C)
+0.3
+0.3
N.D.
N.D.
-0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.5
+0.1
N.D.
N.D.
+0.1
temperature
R2A 15C; 144 hours
+0.6
+0.2
N.D.
N.D.
+0.0
stress
Erythromycin stress 0.05 mg/ml
+0.3
+0.5
N.D.
N.D.
-0.0
carbon source
Pullulan (C)
+0.8
+0.1
N.D.
N.D.
-0.0
motility_chemotaxis
R2A motility; outer cut
+0.9
+0.1
N.D.
N.D.
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+1.0
+0.4
N.D.
N.D.
+0.1
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