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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS03720 and ABZR88_RS03725 are separated by 88 nucleotides
ABZR88_RS03725 and ABZR88_RS03730 are separated by 60 nucleotides
ABZR88_RS03730 and ABZR88_RS03735 are separated by 344 nucleotides
ABZR88_RS03735 and ABZR88_RS03740 are separated by 11 nucleotides
ABZR88_RS03720: ABZR88_RS03720 - metallophosphoesterase, at 883,145 to 883,957
_RS03720
ABZR88_RS03725: ABZR88_RS03725 - DUF4286 family protein, at 884,046 to 884,360
_RS03725
ABZR88_RS03730: ABZR88_RS03730 - tetratricopeptide repeat protein, at 884,421 to 886,220
_RS03730
ABZR88_RS03735: ABZR88_RS03735 - prolyl oligopeptidase family serine peptidase, at 886,565 to 888,439
_RS03735
ABZR88_RS03740: ABZR88_RS03740 - sensor histidine kinase KdpD, at 888,451 to 890,091
_RS03740
Group
Condition
ABZR88
_RS03720
ABZR88
_RS03725
ABZR88
_RS03730
ABZR88
_RS03735
ABZR88
_RS03740
stress
potassium fluoride stress 30 mM
+0.1
-0.2
-0.2
-2.2
-0.2
carbon source
L-Rhamnose (C)
-0.3
-0.2
-0.1
-2.0
+0.0
stress
potassium fluoride stress 30 mM
+0.3
+0.0
-0.2
-2.4
-0.2
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
+0.0
+0.2
-0.2
-1.8
+0.1
carbon source
L-Arabinose (C)
+0.0
+0.1
+0.0
-2.2
+0.2
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.2
-0.3
-0.1
-0.8
-0.2
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.0
-0.2
-0.2
-1.1
+0.0
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
+0.2
-0.3
-0.2
-1.4
+0.1
stress
Erythromycin stress 0.05 mg/ml
-0.1
+0.0
-0.3
-0.7
-0.4
carbon source
L-Rhamnose (C)
+0.0
-0.2
-0.1
-1.0
-0.1
stress
Erythromycin stress 0.05 mg/ml
+0.1
-0.1
-0.3
-0.7
-0.3
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.3
-0.3
+0.1
-0.4
-0.2
carbon source
D-Fructose (C)
+0.1
+0.1
+0.1
-1.1
-0.1
temperature
R2A 15C; 144 hours
+0.1
-0.5
-0.1
-0.1
-0.2
temperature
R2A 15C; 144 hours
+0.1
-0.0
+0.0
-0.6
-0.3
no stress control
R2A no stress control
+0.1
-0.7
-0.1
-0.2
+0.1
carbon source
D-Fructose (C)
+0.2
-0.2
+0.3
-1.0
+0.1
carbon source
L-Arabinose (C)
+0.1
+0.2
-0.1
-1.2
+0.3
carbon source
Beta-Lactose (C)
+0.0
+0.2
-0.1
-0.7
+0.0
stress
Kanamycin sulfate stress 0.05 mg/ml
+0.1
+0.1
-0.1
-0.6
-0.0
carbon source
alginate (C)
+0.1
-0.2
-0.2
-0.5
+0.2
carbon source
alginate (C)
+0.1
+0.1
-0.2
-0.4
+0.0
carbon source
D-Xylose (C)
+0.1
+0.2
+0.1
-0.8
+0.1
carbon source
Beta-Lactose (C)
+0.1
+0.2
+0.1
-0.8
+0.2
stress
Trimethoprim stress 0.05 mg/ml
+0.3
+0.1
-0.3
-0.1
-0.1
carbon source
D-Xylose (C)
+0.4
+0.2
+0.0
-0.7
+0.2
carbon source
Pullulan (C)
-0.2
+0.0
-0.1
+0.4
+0.3
motility_chemotaxis
R2A motility; outer cut
+0.4
-0.3
+0.2
+0.4
-0.2
motility_chemotaxis
R2A motility; outer cut
+0.2
+0.2
+0.3
-0.1
+0.2
motility_chemotaxis
R2A motility; outer cut
+0.8
-0.2
+0.3
+0.0
+0.1
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