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Cofit
Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS03510 and ABZR88_RS03515 are separated by 43 nucleotides
ABZR88_RS03515 and ABZR88_RS03520 overlap by 11 nucleotides
ABZR88_RS03520 and ABZR88_RS03525 are separated by 150 nucleotides
ABZR88_RS03525 and ABZR88_RS03530 are separated by 74 nucleotides
ABZR88_RS03510: ABZR88_RS03510 - metallophosphoesterase, at 840,484 to 841,773
_RS03510
ABZR88_RS03515: ABZR88_RS03515 - hypothetical protein, at 841,817 to 842,710
_RS03515
ABZR88_RS03520: ABZR88_RS03520 - class I SAM-dependent methyltransferase, at 842,700 to 843,332
_RS03520
ABZR88_RS03525: ABZR88_RS03525 - cupin-like domain-containing protein, at 843,483 to 844,364
_RS03525
ABZR88_RS03530: ABZR88_RS03530 - cupin-like domain-containing protein, at 844,439 to 845,341
_RS03530
Group
Condition
ABZR88
_RS03510
ABZR88
_RS03515
ABZR88
_RS03520
ABZR88
_RS03525
ABZR88
_RS03530
no stress control
R2A no stress control
-0.4
-0.5
-0.2
-0.3
-0.9
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.0
-0.0
+0.0
-0.4
-0.7
stress
R2A with Apigenin 50 ug/ml
+0.2
-0.2
-0.1
-0.2
-0.6
stress
Erythromycin stress 0.05 mg/ml
-0.3
+0.1
+0.3
-0.1
-0.8
stress
copper (II) chloride stress 1 mM
+0.1
+0.1
-0.2
-0.1
-0.7
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
+0.0
+0.0
-0.1
-0.9
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.0
+0.2
+0.0
-0.1
-0.8
stress
copper (II) chloride stress 1 mM
+0.2
+0.0
+0.3
-0.1
-1.0
temperature
R2A 15C; 72 hours
+0.3
+0.2
-0.1
-0.1
-0.7
carbon source
alginate (C)
+0.3
-0.0
+0.1
-0.2
-0.6
carbon source
L-Arabinose (C)
+0.2
+0.5
-0.2
-0.1
-0.7
carbon source
D-Maltose (C)
+0.3
-0.0
+0.2
-0.0
-0.5
carbon source
alginate (C)
+0.5
+0.2
-0.1
+0.0
-0.7
carbon source
Pullulan (C)
+0.3
+0.3
+0.0
-0.1
-0.5
carbon source
Pullulan (C)
+0.3
+0.2
+0.1
-0.0
-0.6
carbon source
D-Maltose (C)
+0.6
+0.4
-0.2
+0.0
-0.7
temperature
R2A 15C; 72 hours
+0.4
+0.2
+0.4
-0.1
-0.6
temperature
R2A 15C; 144 hours
+0.7
+0.2
+0.2
-0.0
-0.9
carbon source
L-Arabinose (C)
+0.2
+0.6
+0.1
-0.1
-0.5
carbon source
L-Rhamnose (C)
+0.2
+0.2
+0.4
+0.1
-0.4
carbon source
D-Xylose (C)
+0.3
+0.3
+0.1
+0.1
-0.4
carbon source
L-Rhamnose (C)
-0.1
+0.3
+0.6
+0.0
-0.4
carbon source
Pullulan (C)
+0.3
+0.2
+0.2
+0.1
-0.3
temperature
R2A 15C; 144 hours
+0.8
+0.3
+0.0
-0.0
-0.7
temperature
R2A 30C; 144 hours
+0.3
+0.2
+0.3
+0.3
-0.5
motility_chemotaxis
R2A motility; outer cut
+1.0
+0.4
-0.2
-0.3
-0.3
carbon source
Pullulan (C)
+0.3
+0.4
+0.4
+0.1
-0.5
motility_chemotaxis
R2A motility; outer cut
+0.7
+0.2
+0.5
-0.2
-0.3
motility_chemotaxis
R2A motility; outer cut
+1.2
+0.5
+0.0
-0.1
-0.4
motility_chemotaxis
R2A motility; outer cut
+1.7
+0.2
+0.0
+0.2
-0.3
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