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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS03210 and ABZR88_RS03215 are separated by 193 nucleotides
ABZR88_RS03215 and ABZR88_RS03220 are separated by 20 nucleotides
ABZR88_RS03220 and ABZR88_RS03225 are separated by 251 nucleotides
ABZR88_RS03225 and ABZR88_RS03230 are separated by 56 nucleotides
ABZR88_RS03210: ABZR88_RS03210 - FecR family protein, at 775,189 to 776,352
_RS03210
ABZR88_RS03215: ABZR88_RS03215 - TonB-dependent receptor, at 776,546 to 779,836
_RS03215
ABZR88_RS03220: ABZR88_RS03220 - RagB/SusD family nutrient uptake outer membrane protein, at 779,857 to 781,722
_RS03220
ABZR88_RS03225: ABZR88_RS03225 - hypothetical protein, at 781,974 to 783,071
_RS03225
ABZR88_RS03230: ABZR88_RS03230 - tRNA-Leu, at 783,128 to 783,211
_RS03230
Group
Condition
ABZR88
_RS03210
ABZR88
_RS03215
ABZR88
_RS03220
ABZR88
_RS03225
ABZR88
_RS03230
temperature
R2A 30C; 144 hours
-0.3
-0.2
-0.2
+0.0
N.D.
stress
R2A with Apigenin 50 ug/ml
-0.3
-0.1
-0.1
-0.1
N.D.
stress
Trimethoprim stress 0.05 mg/ml
-0.2
+0.0
-0.1
-0.1
N.D.
carbon source
D-Maltose (C)
-0.3
-0.1
+0.1
+0.1
N.D.
carbon source
D-Glucose (C)
-0.1
-0.0
-0.2
+0.1
N.D.
stress
R2A_low_K2HPO4
-0.2
-0.1
-0.1
+0.0
N.D.
stress
Erythromycin stress 0.05 mg/ml
-0.3
+0.2
+0.0
-0.2
N.D.
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.2
-0.1
-0.2
+0.2
N.D.
stress
Kanamycin sulfate stress 0.05 mg/ml
-0.1
-0.0
-0.2
+0.1
N.D.
carbon source
Starch (C)
-0.2
-0.0
+0.1
+0.1
N.D.
stress
Esculin Monohydrate stress 5 mM
-0.0
+0.0
-0.2
+0.1
N.D.
temperature
R2A 15C; 144 hours
-0.1
+0.1
-0.2
+0.2
N.D.
temperature
R2A 30C
-0.1
+0.1
-0.1
+0.2
N.D.
motility_chemotaxis
R2A motility; outer cut
-0.2
+0.2
+0.2
-0.1
N.D.
motility_chemotaxis
R2A motility; outer cut
-0.2
+0.0
+0.2
+0.0
N.D.
carbon source
Pullulan (C)
-0.1
+0.2
+0.1
-0.1
N.D.
carbon source
L-Rhamnose (C)
+0.3
+0.1
-0.0
-0.2
N.D.
stress
Erythromycin stress 0.05 mg/ml
-0.1
+0.0
+0.1
+0.2
N.D.
carbon source
L-Arabinose (C)
+0.2
-0.1
+0.1
-0.0
N.D.
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.1
+0.1
+0.1
+0.1
N.D.
stress
NaCl stress 100 mM
+0.3
+0.0
-0.1
+0.0
N.D.
carbon source
D-Fructose (C)
+0.2
+0.0
-0.0
+0.1
N.D.
temperature
R2A 15C; 72 hours
+0.2
+0.1
-0.1
+0.2
N.D.
carbon source
Pullulan (C)
+0.2
+0.2
+0.0
-0.1
N.D.
temperature
R2A 15C; 72 hours
+0.2
+0.1
-0.1
+0.1
N.D.
carbon source
Pullulan (C)
+0.0
+0.1
+0.2
+0.1
N.D.
motility_chemotaxis
R2A motility; outer cut
+0.2
+0.1
-0.0
+0.2
N.D.
no stress control
R2A no stress control
+0.4
+0.2
-0.1
+0.0
N.D.
carbon source
D-Xylose (C)
+0.2
+0.1
+0.0
+0.2
N.D.
motility_chemotaxis
R2A motility; outer cut
+0.2
+0.3
+0.0
+0.1
N.D.
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