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Protein
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Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS02850 and ABZR88_RS02855 are separated by 11 nucleotides
ABZR88_RS02855 and ABZR88_RS02860 are separated by 173 nucleotides
ABZR88_RS02860 and ABZR88_RS02865 are separated by 40 nucleotides
ABZR88_RS02865 and ABZR88_RS02870 are separated by 178 nucleotides
ABZR88_RS02850: ABZR88_RS02850 - pirin family protein, at 678,050 to 678,919
_RS02850
ABZR88_RS02855: ABZR88_RS02855 - GNAT family N-acetyltransferase, at 678,931 to 679,224
_RS02855
ABZR88_RS02860: ABZR88_RS02860 - hypothetical protein, at 679,398 to 679,661
_RS02860
ABZR88_RS02865: ABZR88_RS02865 - hypothetical protein, at 679,702 to 680,193
_RS02865
ABZR88_RS02870: ABZR88_RS02870 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 680,372 to 681,112
_RS02870
Group
Condition
ABZR88
_RS02850
ABZR88
_RS02855
ABZR88
_RS02860
ABZR88
_RS02865
ABZR88
_RS02870
temperature
R2A 30C
-0.1
-0.4
-0.5
N.D.
-0.2
carbon source
D-Maltose (C)
+0.1
-0.3
-0.8
N.D.
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.0
-0.5
-0.2
N.D.
-0.4
carbon source
Starch (C)
-0.0
-0.5
-0.3
N.D.
-0.2
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.2
-0.5
-0.4
N.D.
+0.0
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
-0.3
-0.5
-0.3
N.D.
+0.2
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
-0.3
-0.6
N.D.
-0.2
stress
Esculin Monohydrate stress 5 mM
+0.1
-0.4
-0.3
N.D.
-0.3
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.0
-0.3
+0.0
N.D.
-0.7
carbon source
Pullulan (C)
+0.1
-0.2
-0.8
N.D.
-0.0
no stress control
R2A no stress control
-0.1
-0.2
+0.0
N.D.
-0.7
stress
R2A_high_K2HPO4
-0.2
-0.2
-0.4
N.D.
-0.1
carbon source
L-Rhamnose (C)
-0.2
-0.5
+0.4
N.D.
-0.4
stress
Quercetin stress 0.05 mg/ml
-0.2
+0.4
-0.8
N.D.
-0.2
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
-0.2
-0.3
-0.2
N.D.
+0.0
carbon source
Melibiose (C)
-0.1
+0.2
-0.6
N.D.
-0.1
stress
R2A_high_K2HPO4
+0.1
+0.1
-0.6
N.D.
-0.2
temperature
R2A 15C; 144 hours
+0.1
+0.1
-0.4
N.D.
-0.4
carbon source
L-Arabinose (C)
-0.2
+0.3
-0.5
N.D.
-0.0
stress
potassium fluoride stress 30 mM
-0.1
+0.3
-0.5
N.D.
-0.2
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.2
-0.6
N.D.
+0.4
carbon source
L-Arabinose (C)
-0.1
+0.4
-0.3
N.D.
-0.5
stress
Esculin Monohydrate stress 5 mM
-0.2
+0.2
-0.3
N.D.
-0.0
stress
NaCl stress 100 mM
-0.0
+0.3
-0.5
N.D.
-0.1
carbon source
D-Xylose (C)
-0.3
+0.3
-0.2
N.D.
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.0
-0.3
+0.4
N.D.
-0.2
stress
copper (II) chloride stress 1 mM
-0.0
+0.4
-0.2
N.D.
-0.1
carbon source
Beta-Lactose (C)
-0.2
+0.3
+0.1
N.D.
+0.2
carbon source
alginate (C)
-0.1
+0.3
-0.0
N.D.
+0.3
motility_chemotaxis
R2A motility; outer cut
+0.2
-0.4
+1.7
N.D.
-0.4
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