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Cofit
Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS02755 and ABZR88_RS02760 overlap by 4 nucleotides
ABZR88_RS02760 and ABZR88_RS02765 are separated by 73 nucleotides
ABZR88_RS02765 and ABZR88_RS02770 are separated by 87 nucleotides
ABZR88_RS02770 and ABZR88_RS02775 are separated by 85 nucleotides
ABZR88_RS02755: ABZR88_RS02755 - dethiobiotin synthase, at 648,823 to 649,458
_RS02755
ABZR88_RS02760: ABZR88_RS02760 - pyridoxal phosphate-dependent aminotransferase family protein, at 649,455 to 650,570
_RS02760
ABZR88_RS02765: ABZR88_RS02765 - periplasmic heavy metal sensor, at 650,644 to 651,057
_RS02765
ABZR88_RS02770: ABZR88_RS02770 - LexA family transcriptional regulator, at 651,145 to 651,924
_RS02770
ABZR88_RS02775: ABZR88_RS02775 - nuclease, at 652,010 to 652,369
_RS02775
Group
Condition
ABZR88
_RS02755
ABZR88
_RS02760
ABZR88
_RS02765
ABZR88
_RS02770
ABZR88
_RS02775
carbon source
D-Xylose (C)
-0.4
-0.2
N.D.
-1.8
+0.1
carbon source
L-Arabinose (C)
-0.5
-0.2
N.D.
-1.4
-0.1
no stress control
R2A no stress control
-1.2
-0.3
N.D.
-0.6
+0.1
stress
potassium fluoride stress 30 mM
-0.5
+0.0
N.D.
-1.3
-0.0
temperature
R2A 30C; 144 hours
-0.1
-0.3
N.D.
-1.4
+0.1
carbon source
L-Arabinose (C)
-0.4
-0.1
N.D.
-0.5
-0.5
carbon source
D-Xylose (C)
-0.2
-0.2
N.D.
-1.1
+0.2
stress
potassium fluoride stress 30 mM
-0.2
-0.1
N.D.
-1.0
+0.1
motility_chemotaxis
R2A motility; outer cut
-0.1
-0.4
N.D.
-0.6
-0.1
carbon source
L-Rhamnose (C)
-0.3
+0.0
N.D.
-0.8
+0.0
carbon source
Starch (C)
-0.1
-0.4
N.D.
-0.4
-0.2
carbon source
alginate (C)
-0.4
+0.2
N.D.
-0.5
-0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.0
+0.0
N.D.
-1.1
+0.3
carbon source
Beta-Lactose (C)
-0.2
-0.3
N.D.
-0.6
+0.3
motility_chemotaxis
R2A motility; outer cut
+0.2
-0.3
N.D.
-0.5
+0.3
stress
Quercetin stress 0.05 mg/ml
-0.3
-0.5
N.D.
+1.0
-0.2
carbon source
L-Rhamnose (C)
-0.5
+0.1
N.D.
+0.6
-0.1
temperature
R2A 15C; 72 hours
-0.2
-0.5
N.D.
+0.8
+0.0
temperature
R2A 15C; 144 hours
-0.4
-0.4
N.D.
+0.9
-0.1
stress
NaCl stress 100 mM
-0.2
-0.1
N.D.
+0.6
-0.1
stress
Esculin Monohydrate stress 5 mM
-0.1
-0.2
N.D.
+0.7
-0.1
carbon source
Pullulan (C)
-0.1
-0.3
N.D.
+1.0
-0.2
carbon source
Pullulan (C)
-0.2
-0.2
N.D.
+0.9
+0.1
temperature
R2A 21C
-0.4
-0.3
N.D.
+1.2
+0.2
carbon source
Pullulan (C)
-0.3
-0.1
N.D.
+1.2
-0.0
temperature
R2A 15C; 144 hours
-0.4
-0.3
N.D.
+1.5
-0.0
motility_chemotaxis
R2A motility; outer cut
+0.4
+0.5
N.D.
+0.1
-0.2
carbon source
Pullulan (C)
+0.2
-0.3
N.D.
+1.1
-0.1
stress
Erythromycin stress 0.05 mg/ml
-0.3
+0.0
N.D.
+1.8
-0.2
stress
Erythromycin stress 0.05 mg/ml
-0.1
-0.1
N.D.
+1.8
+0.0
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