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Cofit
Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS02055 and ABZR88_RS02060 are separated by 345 nucleotides
ABZR88_RS02060 and ABZR88_RS02065 are separated by 2 nucleotides
ABZR88_RS02065 and ABZR88_RS02070 are separated by 3 nucleotides
ABZR88_RS02070 and ABZR88_RS02075 are separated by 268 nucleotides
ABZR88_RS02055: ABZR88_RS02055 - signal peptidase I, at 461,325 to 462,776
_RS02055
ABZR88_RS02060: ABZR88_RS02060 - undecaprenyl-diphosphate phosphatase, at 463,122 to 463,928
_RS02060
ABZR88_RS02065: ABZR88_RS02065 - DUF3098 domain-containing protein, at 463,931 to 464,200
_RS02065
ABZR88_RS02070: ABZR88_RS02070 - ABC transporter permease, at 464,204 to 465,082
_RS02070
ABZR88_RS02075: ABZR88_RS02075 - ATP-binding protein, at 465,351 to 466,682
_RS02075
Group
Condition
ABZR88
_RS02055
ABZR88
_RS02060
ABZR88
_RS02065
ABZR88
_RS02070
ABZR88
_RS02075
motility_chemotaxis
R2A motility; outer cut
-1.8
N.D.
N.D.
N.D.
-0.3
stress
potassium fluoride stress 30 mM
-1.6
N.D.
N.D.
N.D.
-0.3
stress
potassium fluoride stress 30 mM
-1.5
N.D.
N.D.
N.D.
-0.1
motility_chemotaxis
R2A motility; outer cut
-1.4
N.D.
N.D.
N.D.
-0.1
motility_chemotaxis
R2A motility; outer cut
-1.3
N.D.
N.D.
N.D.
-0.1
carbon source
alginate (C)
-0.8
N.D.
N.D.
N.D.
-0.1
motility_chemotaxis
R2A motility; outer cut
-1.1
N.D.
N.D.
N.D.
+0.2
carbon source
D-Maltose (C)
-0.8
N.D.
N.D.
N.D.
-0.1
carbon source
Starch (C)
-0.7
N.D.
N.D.
N.D.
-0.1
carbon source
Starch (C)
-0.5
N.D.
N.D.
N.D.
-0.1
carbon source
D-Xylose (C)
-0.5
N.D.
N.D.
N.D.
-0.1
carbon source
D-Maltose (C)
-0.7
N.D.
N.D.
N.D.
+0.1
carbon source
L-Arabinose (C)
-0.3
N.D.
N.D.
N.D.
-0.2
carbon source
D-Xylose (C)
-0.4
N.D.
N.D.
N.D.
-0.1
carbon source
alginate (C)
-0.6
N.D.
N.D.
N.D.
+0.2
carbon source
L-Arabinose (C)
-0.4
N.D.
N.D.
N.D.
+0.0
carbon source
D-Glucose (C)
-0.4
N.D.
N.D.
N.D.
-0.0
carbon source
Beta-Lactose (C)
-0.2
N.D.
N.D.
N.D.
+0.1
temperature
R2A 21C
+0.4
N.D.
N.D.
N.D.
-0.0
stress
Trimethoprim stress 0.05 mg/ml
+0.4
N.D.
N.D.
N.D.
-0.0
temperature
R2A 15C; 72 hours
+0.7
N.D.
N.D.
N.D.
-0.2
carbon source
L-Rhamnose (C)
+0.5
N.D.
N.D.
N.D.
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.6
N.D.
N.D.
N.D.
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.6
N.D.
N.D.
N.D.
+0.0
temperature
R2A 15C; 144 hours
+0.6
N.D.
N.D.
N.D.
-0.0
temperature
R2A 15C; 72 hours
+0.6
N.D.
N.D.
N.D.
+0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.7
N.D.
N.D.
N.D.
+0.1
temperature
R2A 15C; 144 hours
+0.9
N.D.
N.D.
N.D.
+0.1
stress
Erythromycin stress 0.05 mg/ml
+5.6
N.D.
N.D.
N.D.
-0.1
stress
Erythromycin stress 0.05 mg/ml
+5.9
N.D.
N.D.
N.D.
-0.1
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