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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS01885 and ABZR88_RS01890 are separated by 758 nucleotides
ABZR88_RS01890 and ABZR88_RS01895 are separated by 30 nucleotides
ABZR88_RS01895 and ABZR88_RS01900 are separated by 155 nucleotides
ABZR88_RS01900 and ABZR88_RS01905 are separated by 304 nucleotides
ABZR88_RS01885: ABZR88_RS01885 - methionine-R-sulfoxide reductase, at 428,152 to 428,517
_RS01885
ABZR88_RS01890: ABZR88_RS01890 - ribonucleoside-diphosphate reductase small subunit, at 429,276 to 430,250
_RS01890
ABZR88_RS01895: ABZR88_RS01895 - four helix bundle protein, at 430,281 to 430,661
_RS01895
ABZR88_RS01900: ABZR88_RS01900 - ribonucleoside-diphosphate reductase subunit alpha, at 430,817 to 433,195
_RS01900
ABZR88_RS01905: ABZR88_RS01905 - cysteine-rich CWC family protein, at 433,500 to 433,712
_RS01905
Group
Condition
ABZR88
_RS01885
ABZR88
_RS01890
ABZR88
_RS01895
ABZR88
_RS01900
ABZR88
_RS01905
carbon source
L-Arabinose (C)
N.D.
N.D.
-0.4
N.D.
-0.2
carbon source
L-Arabinose (C)
N.D.
N.D.
-0.3
N.D.
-0.3
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
N.D.
N.D.
+0.2
N.D.
-0.6
temperature
R2A 21C
N.D.
N.D.
-0.0
N.D.
-0.4
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
N.D.
N.D.
-0.8
N.D.
+0.4
stress
R2A_high_K2HPO4
N.D.
N.D.
+0.1
N.D.
-0.4
carbon source
D-Fructose (C)
N.D.
N.D.
+0.1
N.D.
-0.3
carbon source
D-Xylose (C)
N.D.
N.D.
+0.1
N.D.
-0.3
no stress control
R2A no stress control
N.D.
N.D.
+0.4
N.D.
-0.5
motility_chemotaxis
R2A motility; outer cut
N.D.
N.D.
-0.3
N.D.
+0.2
stress
R2A_low_K2HPO4
N.D.
N.D.
+0.2
N.D.
-0.3
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
N.D.
N.D.
+0.4
N.D.
-0.3
motility_chemotaxis
R2A motility; outer cut
N.D.
N.D.
-0.4
N.D.
+0.6
carbon source
D-Glucose (C)
N.D.
N.D.
+0.3
N.D.
-0.1
stress
Erythromycin stress 0.05 mg/ml
N.D.
N.D.
-0.2
N.D.
+0.4
carbon source
D-Fructose (C)
N.D.
N.D.
+0.3
N.D.
-0.1
carbon source
Pullulan (C)
N.D.
N.D.
-0.0
N.D.
+0.3
temperature
R2A 30C; 144 hours
N.D.
N.D.
+0.4
N.D.
-0.0
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
N.D.
N.D.
+0.7
N.D.
-0.3
carbon source
Starch (C)
N.D.
N.D.
+0.2
N.D.
+0.2
carbon source
alginate (C)
N.D.
N.D.
+0.2
N.D.
+0.1
carbon source
D-Maltose (C)
N.D.
N.D.
+0.4
N.D.
-0.0
temperature
R2A 15C; 144 hours
N.D.
N.D.
+0.3
N.D.
+0.1
stress
Erythromycin stress 0.05 mg/ml
N.D.
N.D.
+0.1
N.D.
+0.4
motility_chemotaxis
R2A motility; outer cut
N.D.
N.D.
+0.4
N.D.
+0.1
carbon source
D-Glucose (C)
N.D.
N.D.
+0.5
N.D.
+0.0
carbon source
Melibiose (C)
N.D.
N.D.
+0.3
N.D.
+0.2
carbon source
Pullulan (C)
N.D.
N.D.
+0.5
N.D.
+0.1
carbon source
L-Rhamnose (C)
N.D.
N.D.
+0.2
N.D.
+0.4
carbon source
D-Maltose (C)
N.D.
N.D.
+0.4
N.D.
+0.4
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