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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS24090 and ABIE41_RS24095 are separated by 122 nucleotides
ABIE41_RS24095 and ABIE41_RS24100 are separated by 4 nucleotides
ABIE41_RS24100 and ABIE41_RS24105 are separated by 23 nucleotides
ABIE41_RS24105 and ABIE41_RS24110 are separated by 30 nucleotides
ABIE41_RS24090: ABIE41_RS24090 - cisplatin damage response ATP-dependent DNA ligase, at 4,973,756 to 4,975,393
_RS24090
ABIE41_RS24095: ABIE41_RS24095 - SGNH/GDSL hydrolase family protein, at 4,975,516 to 4,976,283
_RS24095
ABIE41_RS24100: ABIE41_RS24100 - ligase-associated DNA damage response exonuclease, at 4,976,288 to 4,977,370
_RS24100
ABIE41_RS24105: ABIE41_RS24105 - methyltransferase domain-containing protein, at 4,977,394 to 4,978,410
_RS24105
ABIE41_RS24110: ABIE41_RS24110 - response regulator, at 4,978,441 to 4,978,839
_RS24110
Group
Condition
ABIE41
_RS24090
ABIE41
_RS24095
ABIE41
_RS24100
ABIE41
_RS24105
ABIE41
_RS24110
carbon source
L-Proline (C)
-0.2
-0.0
-0.2
-0.1
-0.5
carbon source
Fumarate (C)
+0.1
-0.4
-0.2
-0.1
-0.3
carbon source
D-Glucose-6-Phosphate (C)
+0.1
-0.7
+0.2
-0.0
-0.1
stress
R2A with 3-octanone 5.3129 mM
-0.3
-0.0
+0.3
-0.1
-0.5
carbon source
D-Raffinose (C)
+0.0
+0.2
-0.1
+0.1
-0.6
carbon source
L-Arabinose (C)
+0.2
+0.1
-0.3
-0.0
-0.3
carbon source
D-Trehalose (C)
-0.0
-0.6
-0.2
+0.1
+0.3
r2a no stress control
R2A no stress control
-0.1
-0.7
+0.2
+0.2
+0.1
carbon source
m-Inositol (C)
+0.1
-0.5
+0.2
-0.0
-0.1
carbon source
D-Gluconic Acid (C)
+0.2
-0.3
+0.4
-0.1
-0.3
r2a outgrowth control
R2A outgrowth control
+0.2
+0.2
+0.1
-0.4
-0.3
carbon source
succinate (C)
+0.3
-0.2
-0.1
+0.1
-0.2
carbon source
D-Ribose (C)
+0.2
+0.0
-0.3
-0.2
+0.2
carbon source
succinate (C)
+0.1
-0.0
+0.1
+0.3
-0.6
carbon source
D-Arabinose (C)
+0.1
-0.3
+0.3
+0.0
-0.2
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.0
-0.5
+0.1
+0.1
+0.2
stress
R2A with 1-octen-3-ol 0.493390333333333 mM
-0.1
-0.3
+0.3
-0.2
+0.2
carbon source
D-Lactate (C)
+0.1
+0.3
-0.0
-0.1
-0.3
carbon source
Ying_all64 rep A; time point 1
-0.1
+0.3
-0.0
+0.2
-0.3
stress
R2A with 3-octanone 5.31033333333333 mM
-0.0
-0.2
-0.1
+0.4
+0.1
carbon source
Ying_AminoAcid20 rep C; time point 1
+0.1
+0.3
+0.0
+0.1
-0.4
carbon source
L-Rhamnose (C)
+0.1
+0.3
+0.2
-0.1
-0.2
carbon source
L-Histidine (C)
+0.1
+0.3
+0.3
+0.1
-0.4
carbon source
D-Glucosamine Hydrochloride (C)
+0.2
+0.3
-0.0
+0.3
-0.2
carbon source
NAG (C)
+0.1
+0.2
+0.2
+0.2
-0.2
stress
R2A with 3-octanone 2.65516666666667 mM
+0.1
+0.2
-0.2
+0.1
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.1
+0.1
+0.4
+0.1
-0.2
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.2
+0.5
+0.5
+0.0
-0.1
carbon source
L-Histidine (C)
+0.1
+0.4
+0.3
+0.3
+0.0
carbon source
Trisodium citrate (C)
+0.1
+0.8
+0.1
+0.2
+0.1
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