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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS23665 and ABIE41_RS23670 are separated by 8 nucleotides
ABIE41_RS23670 and ABIE41_RS23675 are separated by 157 nucleotides
ABIE41_RS23675 and ABIE41_RS23680 are separated by 113 nucleotides
ABIE41_RS23680 and ABIE41_RS23685 are separated by 186 nucleotides
ABIE41_RS23665: ABIE41_RS23665 - TRAP transporter large permease, at 4,877,521 to 4,878,927
_RS23665
ABIE41_RS23670: ABIE41_RS23670 - TRAP transporter small permease, at 4,878,936 to 4,879,514
_RS23670
ABIE41_RS23675: ABIE41_RS23675 - sialic acid TRAP transporter substrate-binding protein SiaP, at 4,879,672 to 4,880,622
_RS23675
ABIE41_RS23680: ABIE41_RS23680 - FCD domain-containing protein, at 4,880,736 to 4,881,494
_RS23680
ABIE41_RS23685: ABIE41_RS23685 - ABC transporter ATP-binding protein, at 4,881,681 to 4,882,460
_RS23685
Group
Condition
ABIE41
_RS23665
ABIE41
_RS23670
ABIE41
_RS23675
ABIE41
_RS23680
ABIE41
_RS23685
r2a outgrowth control
R2A outgrowth control
-0.0
-0.2
-0.5
-0.3
-1.0
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.0
-0.4
-0.1
-0.6
+0.2
stress
R2A with 3-octanone 5.31033333333333 mM
+0.2
-0.3
+0.2
-0.2
-0.7
dmso control
DMSO control
-0.0
+0.3
-0.2
-0.1
-0.7
dmso control
DMSO control
-0.0
+0.1
+0.1
+0.0
-0.9
carbon source
a-Cyclodextrin (C)
-0.3
-0.2
+0.2
-0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.2
+0.3
-0.3
-0.3
-0.2
stress
R2A with 3-octanone 2.65516666666667 mM
+0.1
+0.1
+0.2
-0.3
-0.3
carbon source
L-Glutamic (C)
+0.2
-0.6
-0.1
+0.1
+0.3
carbon source
D-Tagatose (C)
-0.3
-0.2
+0.1
-0.4
+0.6
stress
R2A with 3-octanone 2.65516666666667 mM
+0.0
+0.4
+0.1
+0.1
-0.5
carbon source
Fumarate (C)
-0.4
+0.1
+0.0
+0.3
+0.3
carbon source
D-Galacturonic Acid (C)
+0.2
-0.4
+0.4
-0.0
+0.1
carbon source
D-Fructose (C)
+0.1
-0.2
-0.1
-0.1
+0.7
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
-0.0
+0.3
-0.1
+0.6
-0.2
carbon source
D-Alanine (C)
-0.3
+0.3
+0.0
-0.1
+0.5
carbon source
D-Gluconic Acid (C)
-0.2
-0.1
+0.1
+0.4
+0.5
carbon source
Fumarate (C)
-0.0
+0.2
-0.2
+0.1
+0.5
carbon source
L-Rhamnose (C)
+0.4
-0.2
+0.2
-0.1
+0.3
carbon source
L-Arabinose (C)
+0.2
-0.9
-0.4
+0.6
+1.2
carbon source
D-Raffinose (C)
+0.1
+0.1
-0.1
+0.5
+0.3
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
-0.1
+0.4
+0.2
+0.2
+0.2
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.1
+0.4
-0.1
+0.1
+0.8
carbon source
D-Arabinose (C)
-0.1
+0.5
+0.1
+0.0
+0.5
carbon source
D-Lactate (C)
+0.1
+0.1
+0.2
+0.0
+0.6
carbon source
D-Galactose (C)
+0.1
+0.2
+0.5
-0.1
+0.6
carbon source
NAG (C)
+0.1
+0.4
+0.4
-0.0
+0.4
carbon source
D-Xylose (C)
+0.3
+0.6
+0.2
-0.1
+0.4
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.1
+0.3
+0.0
+0.1
+0.9
carbon source
Sucrose (C)
+0.2
+0.5
+0.2
+0.3
+0.5
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