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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS23630 and ABIE41_RS23635 are separated by 5 nucleotides
ABIE41_RS23635 and ABIE41_RS23640 are separated by 104 nucleotides
ABIE41_RS23640 and ABIE41_RS23645 overlap by 4 nucleotides
ABIE41_RS23645 and ABIE41_RS23650 are separated by 99 nucleotides
ABIE41_RS23630: ABIE41_RS23630 - histidine utilization repressor, at 4,868,762 to 4,869,511
_RS23630
ABIE41_RS23635: ABIE41_RS23635 - formimidoylglutamate deiminase, at 4,869,517 to 4,870,884
_RS23635
ABIE41_RS23640: ABIE41_RS23640 - imidazolonepropionase, at 4,870,989 to 4,872,221
_RS23640
ABIE41_RS23645: ABIE41_RS23645 - histidine ammonia-lyase, at 4,872,218 to 4,873,753
_RS23645
ABIE41_RS23650: ABIE41_RS23650 - N-formylglutamate deformylase, at 4,873,853 to 4,874,659
_RS23650
Group
Condition
ABIE41
_RS23630
ABIE41
_RS23635
ABIE41
_RS23640
ABIE41
_RS23645
ABIE41
_RS23650
carbon source
L-Histidine (C)
+0.2
-2.3
-2.0
-2.3
-1.0
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.3
-2.1
-0.8
-0.4
-0.4
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.0
-2.2
-0.7
-0.7
-0.3
carbon source
L-Histidine (C)
+0.6
-0.9
-0.9
-1.3
-1.0
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.1
-1.9
-0.8
-0.4
-0.4
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.3
-1.6
-0.6
-0.3
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.2
-1.3
-0.6
-0.2
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.2
-1.0
-0.2
-0.0
-0.0
carbon source
Ying_AminoAcid20 rep C; time point 1
+0.0
-0.5
-0.2
-0.4
-0.2
carbon source
L-Fucose (C)
-0.5
-0.3
-0.1
-0.2
-0.1
carbon source
D-Raffinose (C)
-0.7
-0.1
+0.1
-0.1
-0.2
stress
R2A with 1-octen-3-ol 0.493390333333333 mM
-0.2
-0.4
-0.2
+0.1
-0.3
carbon source
L-Glutamic (C)
-0.5
-0.4
+0.0
-0.0
-0.1
r2a outgrowth control
R2A outgrowth control
-0.0
-0.5
-0.3
+0.1
-0.1
carbon source
succinate (C)
-0.5
-0.7
+0.1
+0.1
+0.1
stress
R2A with 3-octanone 2.65516666666667 mM
-0.2
-0.5
-0.1
+0.2
-0.2
carbon source
casaminos (C)
-0.5
-0.4
+0.1
+0.1
-0.2
stress
R2A with 1-octen-3-ol 0.493390333333333 mM
+0.3
-0.3
-0.3
-0.1
-0.3
carbon source
Fumarate (C)
-0.6
+0.2
-0.2
-0.0
-0.0
stress
R2A with 3-octanone 5.3129 mM
-0.5
-0.3
+0.2
+0.1
-0.1
carbon source
casaminos (C)
-0.4
-0.5
+0.0
+0.3
-0.0
carbon source
L-Arabinose (C)
-0.0
-0.7
+0.1
-0.2
+0.2
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.3
-0.5
-0.2
-0.0
-0.2
stress
R2A with 3-octanone 5.31033333333333 mM
-0.3
-0.5
+0.1
+0.3
-0.0
carbon source
D-Alanine (C)
-0.3
-0.2
+0.5
+0.1
-0.1
carbon source
D-Galactose (C)
-0.5
+0.1
+0.3
+0.2
-0.1
carbon source
D-Glucose-6-Phosphate (C)
+0.4
-0.3
+0.3
-0.1
-0.2
carbon source
D-Tagatose (C)
+0.1
-0.2
+0.2
+0.4
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.3
+0.1
-0.4
+0.3
+0.2
carbon source
D-Galactose (C)
-0.3
+0.1
+0.2
+0.5
+0.1
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ABIE41_RS23640
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