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Cofit
Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS21490 and ABIE41_RS21495 overlap by 1 nucleotides
ABIE41_RS21495 and ABIE41_RS21500 overlap by 4 nucleotides
ABIE41_RS21500 and ABIE41_RS21505 are separated by 13 nucleotides
ABIE41_RS21505 and ABIE41_RS21510 are separated by 11 nucleotides
ABIE41_RS21490: ABIE41_RS21490 - glycoside hydrolase/phage tail family protein, at 4,418,489 to 4,421,890
_RS21490
ABIE41_RS21495: ABIE41_RS21495 - NlpC/P60 family protein, at 4,421,890 to 4,422,333
_RS21495
ABIE41_RS21500: ABIE41_RS21500 - DUF2163 domain-containing protein, at 4,422,330 to 4,423,211
_RS21500
ABIE41_RS21505: ABIE41_RS21505 - DUF2460 domain-containing protein, at 4,423,225 to 4,423,864
_RS21505
ABIE41_RS21510: ABIE41_RS21510 - phage tail tape measure protein, at 4,423,876 to 4,424,472
_RS21510
Group
Condition
ABIE41
_RS21490
ABIE41
_RS21495
ABIE41
_RS21500
ABIE41
_RS21505
ABIE41
_RS21510
stress
R2A with 3-octanone 5.31033333333333 mM
+0.1
-1.0
-0.4
-0.1
N.D.
carbon source
D-Arabinose (C)
-0.0
-0.7
-0.3
-0.4
N.D.
carbon source
Trisodium citrate (C)
+0.1
-0.6
-0.5
-0.1
N.D.
carbon source
L-Malic (C)
-0.1
-0.5
-0.2
-0.4
N.D.
carbon source
D-Xylose (C)
+0.0
-0.8
-0.2
-0.2
N.D.
stress
R2A with 3-octanone 2.65516666666667 mM
-0.0
-0.8
-0.4
+0.3
N.D.
carbon source
D-Trehalose (C)
-0.1
-0.7
-0.3
+0.3
N.D.
carbon source
D-Maltose (C)
-0.0
-0.4
-0.7
+0.3
N.D.
carbon source
D-Galactose (C)
+0.0
-0.7
+0.2
-0.3
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
-0.6
-0.4
+0.2
N.D.
carbon source
D-Alanine (C)
+0.2
-0.5
-0.3
-0.1
N.D.
carbon source
D-Ribose (C)
-0.1
-0.8
+0.3
-0.1
N.D.
carbon source
D-Fructose (C)
+0.0
-0.5
+0.2
-0.3
N.D.
dmso control
DMSO control
+0.2
-0.2
-0.6
+0.1
N.D.
carbon source
D,L-Lactate (C)
+0.1
-0.7
+0.3
+0.0
N.D.
carbon source
Fumarate (C)
-0.1
-0.5
+0.2
+0.2
N.D.
stress
R2A with 3-octanone 5.3129 mM
+0.1
+0.4
-0.6
-0.1
N.D.
carbon source
D-Arabinose (C)
+0.0
-0.4
-0.2
+0.4
N.D.
carbon source
D-Raffinose (C)
-0.0
+0.0
+0.5
-0.7
N.D.
carbon source
D-Fructose (C)
+0.0
-0.7
+0.4
+0.1
N.D.
carbon source
D-Galacturonic Acid (C)
-0.2
-0.5
+0.3
+0.2
N.D.
carbon source
a-Cyclodextrin (C)
+0.1
-0.4
+0.4
-0.2
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.2
+0.3
-0.2
+0.3
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.1
+0.2
-0.5
+0.4
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
-0.0
+0.3
-0.3
+0.5
N.D.
carbon source
D-Galactose (C)
+0.1
-0.5
+0.6
+0.3
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.3133 mM
+0.1
+0.5
-0.3
+0.2
N.D.
stress
R2A with 1-octen-3-ol 0.493390333333333 mM
+0.1
-0.2
-0.0
+0.7
N.D.
carbon source
L-Rhamnose (C)
+0.0
+0.3
+0.2
+0.5
N.D.
stress
R2A with 3-octanone 5.3129 mM
+0.1
+0.5
+0.2
+0.5
N.D.
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ABIE41_RS21500
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