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Cofit
Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS21255 and ABIE41_RS21260 are separated by 24 nucleotides
ABIE41_RS21260 and ABIE41_RS21265 are separated by 325 nucleotides
ABIE41_RS21265 and ABIE41_RS21270 are separated by 42 nucleotides
ABIE41_RS21270 and ABIE41_RS21275 are separated by 25 nucleotides
ABIE41_RS21255: ABIE41_RS21255 - DUF1289 domain-containing protein, at 4,367,740 to 4,367,913
_RS21255
ABIE41_RS21260: ABIE41_RS21260 - sulfite exporter TauE/SafE family protein, at 4,367,938 to 4,368,771
_RS21260
ABIE41_RS21265: ABIE41_RS21265 - SMP-30/gluconolactonase/LRE family protein, at 4,369,097 to 4,370,338
_RS21265
ABIE41_RS21270: ABIE41_RS21270 - SRPBCC domain-containing protein, at 4,370,381 to 4,370,821
_RS21270
ABIE41_RS21275: ABIE41_RS21275 - metalloregulator ArsR/SmtB family transcription factor, at 4,370,847 to 4,371,200
_RS21275
Group
Condition
ABIE41
_RS21255
ABIE41
_RS21260
ABIE41
_RS21265
ABIE41
_RS21270
ABIE41
_RS21275
carbon source
L-Arabinose (C)
N.D.
-0.4
-0.1
-0.4
N.D.
carbon source
L-Histidine (C)
N.D.
-0.0
-0.2
-0.4
N.D.
carbon source
D-Trehalose (C)
N.D.
-0.0
-0.2
-0.4
N.D.
carbon source
D-Xylose (C)
N.D.
-0.3
-0.2
+0.0
N.D.
carbon source
D-Galactose (C)
N.D.
-0.1
-0.2
-0.2
N.D.
carbon source
pyruvate (C)
N.D.
-0.1
+0.0
-0.3
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
-0.1
+0.1
-0.4
N.D.
carbon source
D-Ribose (C)
N.D.
-0.1
+0.1
-0.3
N.D.
carbon source
D-Arabinose (C)
N.D.
+0.1
-0.0
-0.5
N.D.
carbon source
D-Fructose (C)
N.D.
+0.1
-0.1
-0.3
N.D.
carbon source
a-Cyclodextrin (C)
N.D.
-0.2
+0.2
-0.3
N.D.
carbon source
D-Galacturonic Acid (C)
N.D.
+0.2
-0.3
-0.2
N.D.
carbon source
L-Proline (C)
N.D.
+0.2
-0.4
-0.1
N.D.
carbon source
Fumarate (C)
N.D.
-0.1
+0.2
-0.2
N.D.
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
N.D.
+0.2
-0.3
-0.0
N.D.
carbon source
L-Malic (C)
N.D.
+0.2
-0.1
-0.2
N.D.
carbon source
D,L-Lactate (C)
N.D.
-0.4
+0.2
+0.1
N.D.
stress
R2A with 3-octanone 5.3129 mM
N.D.
+0.2
-0.4
+0.1
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
-0.2
-0.1
+0.2
N.D.
carbon source
D,L-Lactate (C)
N.D.
+0.3
+0.0
-0.3
N.D.
carbon source
D-Mannitol (C)
N.D.
+0.3
+0.1
-0.3
N.D.
carbon source
Sucrose (C)
N.D.
+0.3
+0.3
-0.4
N.D.
carbon source
D-Tagatose (C)
N.D.
+0.3
+0.2
-0.3
N.D.
r2a outgrowth control
R2A outgrowth control
N.D.
+0.3
+0.1
-0.2
N.D.
carbon source
L-Glutamic (C)
N.D.
+0.3
+0.1
-0.1
N.D.
carbon source
L-Proline (C)
N.D.
+0.3
+0.2
-0.1
N.D.
stress
R2A with 3-octanone 2.65516666666667 mM
N.D.
+0.2
+0.1
+0.2
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.3133 mM
N.D.
+0.3
+0.2
+0.1
N.D.
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
N.D.
+0.4
+0.3
-0.1
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
+0.5
+0.2
+0.3
N.D.
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ABIE41_RS21260
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ABIE41_RS21265
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