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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS20945 and ABIE41_RS20950 are separated by 171 nucleotides
ABIE41_RS20950 and ABIE41_RS20955 are separated by 109 nucleotides
ABIE41_RS20955 and ABIE41_RS20960 are separated by 13 nucleotides
ABIE41_RS20960 and ABIE41_RS20965 are separated by 6 nucleotides
ABIE41_RS20945: ABIE41_RS20945 - O-antigen ligase family protein, at 4,309,560 to 4,310,828
_RS20945
ABIE41_RS20950: ABIE41_RS20950 - tripartite tricarboxylate transporter substrate binding protein, at 4,311,000 to 4,311,962
_RS20950
ABIE41_RS20955: ABIE41_RS20955 - tripartite tricarboxylate transporter TctB family protein, at 4,312,072 to 4,312,551
_RS20955
ABIE41_RS20960: ABIE41_RS20960 - tripartite tricarboxylate transporter permease, at 4,312,565 to 4,314,064
_RS20960
ABIE41_RS20965: ABIE41_RS20965 - aldehyde reductase, at 4,314,071 to 4,315,117
_RS20965
Group
Condition
ABIE41
_RS20945
ABIE41
_RS20950
ABIE41
_RS20955
ABIE41
_RS20960
ABIE41
_RS20965
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
+0.0
-0.4
-0.2
-0.7
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
-0.4
-0.4
-0.2
-0.4
stress
R2A with 3-octanone 5.31033333333333 mM
N.D.
+0.2
-0.6
-0.1
-0.8
carbon source
L-Histidine (C)
N.D.
+0.0
-1.0
+0.2
-0.4
stress
R2A with 3-octanone 2.65516666666667 mM
N.D.
-0.4
-0.1
-0.1
-0.4
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
-0.3
-0.2
-0.2
-0.2
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.1
-0.2
-0.1
-0.5
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
N.D.
-0.2
-0.4
-0.1
-0.2
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.5
+0.2
-0.1
-0.5
stress
R2A with 1-octen-3-ol 0.493390333333333 mM
N.D.
+0.0
-0.5
-0.2
-0.1
r2a outgrowth control
R2A outgrowth control
N.D.
+0.2
-1.0
-0.2
+0.1
carbon source
D-Trehalose (C)
N.D.
-0.2
+0.3
-0.2
-0.7
carbon source
D-Glucuronic Acid (C)
N.D.
-0.0
+0.3
+0.2
-0.8
carbon source
D-Lactate (C)
N.D.
+0.0
-0.8
+0.3
+0.2
carbon source
pyruvate (C)
N.D.
+0.3
+0.3
+0.0
-0.7
carbon source
m-Inositol (C)
N.D.
+0.3
+0.1
+0.2
-0.5
carbon source
L-Glutamic (C)
N.D.
+0.1
+0.2
+0.2
-0.5
carbon source
L-Histidine (C)
N.D.
+0.3
+0.3
+0.0
-0.4
carbon source
succinate (C)
N.D.
+0.4
+0.3
-0.0
-0.5
carbon source
D-Arabinose (C)
N.D.
-0.1
+0.3
+0.3
-0.2
carbon source
D-Galacturonic Acid (C)
N.D.
+0.1
+0.5
+0.1
-0.2
carbon source
Fumarate (C)
N.D.
+0.4
+0.2
+0.3
-0.1
carbon source
pyruvate (C)
N.D.
+0.4
+0.5
-0.0
-0.0
carbon source
Ying_AminoAcid20 rep A; time point 2
N.D.
+0.6
+0.2
+0.1
+0.0
carbon source
NAG (C)
N.D.
+0.1
+0.2
+0.2
+0.5
carbon source
Ying_AminoAcid20 rep B; time point 2
N.D.
+0.3
+0.4
+0.2
+0.1
carbon source
D-Alanine (C)
N.D.
+0.0
+0.5
+0.3
+0.2
carbon source
L-Arabinose (C)
N.D.
+0.4
+0.2
+0.4
+0.1
carbon source
Trisodium citrate (C)
N.D.
+0.2
+0.8
+0.4
-0.2
carbon source
D-Mannose (C)
N.D.
+0.1
+0.6
+0.3
+0.5
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ABIE41_RS20955
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