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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS20735 and ABIE41_RS20740 overlap by 4 nucleotides
ABIE41_RS20740 and ABIE41_RS20745 are separated by 100 nucleotides
ABIE41_RS20745 and ABIE41_RS20750 are separated by 40 nucleotides
ABIE41_RS20750 and ABIE41_RS20755 are separated by 73 nucleotides
ABIE41_RS20735: ABIE41_RS20735 - DUF2309 domain-containing protein, at 4,261,232 to 4,263,634
_RS20735
ABIE41_RS20740: ABIE41_RS20740 - NADH-quinone oxidoreductase subunit L, at 4,263,631 to 4,265,217
_RS20740
ABIE41_RS20745: ABIE41_RS20745 - LysR family transcriptional regulator, at 4,265,318 to 4,266,193
_RS20745
ABIE41_RS20750: ABIE41_RS20750 - TRAP transporter large permease subunit, at 4,266,234 to 4,268,114
_RS20750
ABIE41_RS20755: ABIE41_RS20755 - TRAP transporter substrate-binding protein, at 4,268,188 to 4,269,207
_RS20755
Group
Condition
ABIE41
_RS20735
ABIE41
_RS20740
ABIE41
_RS20745
ABIE41
_RS20750
ABIE41
_RS20755
carbon source
D-Ribose (C)
+0.1
-0.2
-1.2
-0.3
-0.3
carbon source
L-Fucose (C)
+0.0
-0.1
-1.0
-0.4
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
-0.2
-0.2
-0.7
+0.1
-0.4
carbon source
casaminos (C)
+0.1
-0.2
-1.0
-0.2
-0.0
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.3
-0.0
-0.3
-0.1
-0.3
carbon source
Sucrose (C)
-0.2
+0.1
-0.7
-0.3
+0.0
carbon source
L-Malic (C)
-0.2
-0.2
-0.5
-0.3
+0.1
carbon source
NAG (C)
+0.1
+0.1
-0.5
-0.2
-0.3
carbon source
pyruvate (C)
-0.1
+0.2
-0.3
-0.2
-0.4
stress
R2A with 3-octanone 2.65516666666667 mM
+0.1
-0.1
-0.5
+0.3
-0.4
carbon source
D-Galacturonic Acid (C)
+0.2
-0.2
-0.5
+0.1
-0.3
carbon source
succinate (C)
+0.2
+0.2
-0.4
-0.3
-0.2
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
-0.0
-0.1
-0.7
+0.3
+0.1
carbon source
D-Lactate (C)
+0.3
-0.2
-0.8
+0.1
+0.2
carbon source
Ying_AminoAcid20 rep C; time point 1
+0.1
-0.0
-0.7
+0.1
+0.3
carbon source
D-Trehalose (C)
+0.2
-0.2
+0.1
-0.5
+0.1
carbon source
Trisodium citrate (C)
-0.2
+0.4
-0.5
+0.3
-0.2
carbon source
L-Proline (C)
+0.2
-0.0
-0.4
+0.2
-0.3
dmso control
DMSO control
+0.2
-0.1
+0.5
-0.3
-0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
-0.1
+0.3
-0.1
+0.4
-0.5
r2a outgrowth control
R2A outgrowth control
-0.1
-0.1
+0.7
-0.2
-0.3
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.0
+0.6
-0.2
+0.0
-0.3
carbon source
m-Inositol (C)
+0.2
-0.1
+0.4
-0.4
+0.1
carbon source
D,L-Lactate (C)
-0.3
-0.1
+0.6
+0.0
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
-0.1
+0.7
-0.0
-0.3
carbon source
D-Fructose (C)
+0.2
+0.0
+0.6
+0.1
-0.3
stress
R2A with 3-octanone 5.31033333333333 mM
+0.1
+0.1
+0.4
-0.3
+0.3
stress
R2A with 3-octanone 5.3129 mM
+0.2
+0.1
+0.5
-0.2
+0.1
carbon source
D-Glucuronic Acid (C)
+0.2
+0.0
+0.5
+0.2
-0.1
carbon source
L-Arabinose (C)
+0.1
+0.3
+0.1
+0.1
+0.4
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ABIE41_RS20745
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