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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS20435 and ABIE41_RS20440 are separated by 75 nucleotides
ABIE41_RS20440 and ABIE41_RS20445 are separated by 111 nucleotides
ABIE41_RS20445 and ABIE41_RS20450 are separated by 174 nucleotides
ABIE41_RS20450 and ABIE41_RS20455 are separated by 80 nucleotides
ABIE41_RS20435: ABIE41_RS20435 - four-carbon acid sugar kinase family protein, at 4,200,659 to 4,201,726
_RS20435
ABIE41_RS20440: ABIE41_RS20440 - LysR family transcriptional regulator, at 4,201,802 to 4,202,680
_RS20440
ABIE41_RS20445: ABIE41_RS20445 - GNAT family N-acetyltransferase, at 4,202,792 to 4,203,307
_RS20445
ABIE41_RS20450: ABIE41_RS20450 - haloacid dehalogenase type II, at 4,203,482 to 4,204,150
_RS20450
ABIE41_RS20455: ABIE41_RS20455 - Lrp/AsnC family transcriptional regulator, at 4,204,231 to 4,204,722
_RS20455
Group
Condition
ABIE41
_RS20435
ABIE41
_RS20440
ABIE41
_RS20445
ABIE41
_RS20450
ABIE41
_RS20455
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.5
-0.4
-0.1
+0.2
-0.2
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.1
-1.1
+0.1
+0.2
-0.0
carbon source
L-Arabinose (C)
+0.6
-0.4
-0.1
-0.3
-0.5
carbon source
Fumarate (C)
-0.6
+0.1
+0.1
+0.3
-0.4
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.3
-0.4
-0.2
+0.1
-0.3
r2a outgrowth control
R2A outgrowth control
-0.1
-0.4
+0.1
+0.3
-0.3
carbon source
a-Cyclodextrin (C)
-0.0
+0.2
+0.3
-0.1
-0.7
carbon source
D-Tagatose (C)
+0.3
+0.0
-0.1
+0.1
-0.6
carbon source
D-Glucuronic Acid (C)
+0.4
+0.1
-0.1
-0.3
-0.4
stress
R2A with 3-octanone 5.31033333333333 mM
+0.5
-0.8
-0.1
+0.1
+0.1
carbon source
NAG (C)
+0.5
-0.6
+0.1
-0.2
+0.1
carbon source
D-Xylose (C)
+0.4
-0.4
-0.0
+0.2
-0.2
carbon source
casaminos (C)
+0.4
-0.6
+0.1
-0.1
+0.3
carbon source
succinate (C)
+0.3
+0.3
+0.1
-0.2
-0.2
carbon source
D-Lactate (C)
+0.6
+0.1
+0.2
+0.0
-0.7
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.4
-0.3
-0.1
+0.2
+0.1
carbon source
Ying_all64 rep C; time point 1
+0.4
+0.1
+0.1
+0.3
-0.5
carbon source
L-Histidine (C)
-0.2
+0.9
-0.0
+0.1
-0.3
carbon source
D-Glucosamine Hydrochloride (C)
+0.5
-0.2
+0.0
-0.0
+0.4
carbon source
D-Maltose (C)
+0.3
+0.6
+0.1
-0.4
+0.0
carbon source
D-Ribose (C)
+0.5
+0.4
-0.1
-0.2
-0.0
carbon source
succinate (C)
+0.4
-0.1
+0.1
-0.1
+0.4
carbon source
Trisodium citrate (C)
+0.4
-0.3
-0.1
+0.3
+0.4
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
+0.6
+0.3
+0.1
+0.0
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.5
+0.2
-0.1
+0.1
+0.3
carbon source
L-Fucose (C)
-0.1
+0.7
+0.0
+0.2
+0.1
carbon source
Sucrose (C)
+0.7
+0.4
+0.1
+0.2
-0.4
carbon source
D-Alanine (C)
+0.3
+0.5
+0.0
+0.2
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
+0.9
-0.0
+0.1
+0.3
stress
R2A with 3-octanone 5.3129 mM
+0.5
+0.6
+0.2
+0.4
-0.1
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ABIE41_RS20445
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