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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS20330 and ABIE41_RS20335 are separated by 43 nucleotides
ABIE41_RS20335 and ABIE41_RS20340 are separated by 254 nucleotides
ABIE41_RS20340 and ABIE41_RS20345 are separated by 386 nucleotides
ABIE41_RS20345 and ABIE41_RS20350 overlap by 4 nucleotides
ABIE41_RS20330: ABIE41_RS20330 - hypothetical protein, at 4,176,725 to 4,177,360
_RS20330
ABIE41_RS20335: ABIE41_RS20335 - tetratricopeptide repeat protein, at 4,177,404 to 4,178,720
_RS20335
ABIE41_RS20340: ABIE41_RS20340 - AraC family transcriptional regulator, at 4,178,975 to 4,179,883
_RS20340
ABIE41_RS20345: ABIE41_RS20345 - hydantoinase/oxoprolinase family protein, at 4,180,270 to 4,182,327
_RS20345
ABIE41_RS20350: ABIE41_RS20350 - hydantoinase B/oxoprolinase family protein, at 4,182,324 to 4,183,979
_RS20350
Group
Condition
ABIE41
_RS20330
ABIE41
_RS20335
ABIE41
_RS20340
ABIE41
_RS20345
ABIE41
_RS20350
stress
R2A with 3-octanone 5.31033333333333 mM
-0.1
-1.5
-0.0
-0.3
-0.1
r2a no stress control
R2A no stress control
-0.2
-0.3
-0.2
-0.2
-0.3
stress
R2A with 3-octanone 5.3129 mM
+0.1
-0.8
-0.1
-0.2
-0.2
carbon source
Ying_all64 rep B; time point 1
-0.1
-0.1
-0.4
-0.1
-0.2
stress
R2A with 3-octanone 2.65516666666667 mM
+0.0
-0.6
+0.0
-0.1
-0.4
carbon source
D-Glucuronic Acid (C)
-0.3
-0.5
+0.0
-0.0
-0.1
carbon source
D-Tagatose (C)
-0.1
-0.5
-0.1
-0.0
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.0
-0.3
-0.2
-0.2
-0.3
carbon source
D-Trehalose (C)
-0.2
-0.8
-0.2
+0.3
-0.1
carbon source
m-Inositol (C)
-0.2
-0.1
-0.3
-0.1
-0.1
carbon source
D-Lactate (C)
+0.2
-0.4
-0.3
+0.1
-0.3
carbon source
D-Galacturonic Acid (C)
-0.3
-0.2
+0.1
-0.1
-0.3
carbon source
D-Glucosamine Hydrochloride (C)
-0.1
-0.5
+0.2
+0.1
-0.5
carbon source
L-Proline (C)
-0.0
-0.6
-0.2
+0.2
-0.0
stress
R2A with 3-octanone 2.65516666666667 mM
+0.0
-0.5
-0.1
+0.1
-0.2
carbon source
Trisodium citrate (C)
-0.2
-0.3
+0.1
-0.0
-0.2
carbon source
pyruvate (C)
-0.3
-0.6
+0.1
+0.1
+0.0
carbon source
D-Arabinose (C)
-0.3
-0.1
-0.3
+0.2
+0.0
carbon source
D-Raffinose (C)
+0.2
-0.1
-0.3
-0.1
-0.1
carbon source
L-Malic (C)
+0.3
-0.4
-0.3
+0.2
-0.2
carbon source
D-Glucose-6-Phosphate (C)
+0.1
-0.3
-0.3
+0.2
-0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
-0.0
-0.0
+0.1
-0.6
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
-0.0
-0.2
+0.3
-0.1
-0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.3
-0.2
+0.0
-0.1
-0.3
carbon source
NAG (C)
-0.4
+0.5
-0.0
-0.1
+0.1
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
-0.2
+0.4
-0.1
+0.2
-0.3
carbon source
D-Ribose (C)
-0.3
+0.4
+0.2
+0.1
-0.2
carbon source
D-Mannitol (C)
-0.0
+0.5
+0.1
-0.0
-0.2
r2a outgrowth control
R2A outgrowth control
-0.1
+0.4
+0.2
+0.2
-0.3
stress
R2A with 3-octanone 5.3129 mM
+0.1
+0.2
+0.4
+0.2
-0.3
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ABIE41_RS20335
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ABIE41_RS20340
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