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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS20205 and ABIE41_RS20210 are separated by 212 nucleotides
ABIE41_RS20210 and ABIE41_RS20215 are separated by 171 nucleotides
ABIE41_RS20215 and ABIE41_RS20220 are separated by 179 nucleotides
ABIE41_RS20220 and ABIE41_RS20225 overlap by 4 nucleotides
ABIE41_RS20205: ABIE41_RS20205 - tRNA-Phe, at 4,154,350 to 4,154,425
_RS20205
ABIE41_RS20210: ABIE41_RS20210 - tRNA-Ser, at 4,154,638 to 4,154,728
_RS20210
ABIE41_RS20215: ABIE41_RS20215 - GntR family transcriptional regulator, at 4,154,900 to 4,155,568
_RS20215
ABIE41_RS20220: ABIE41_RS20220 - amidohydrolase family protein, at 4,155,748 to 4,156,803
_RS20220
ABIE41_RS20225: ABIE41_RS20225 - VOC family protein, at 4,156,800 to 4,157,717
_RS20225
Group
Condition
ABIE41
_RS20205
ABIE41
_RS20210
ABIE41
_RS20215
ABIE41
_RS20220
ABIE41
_RS20225
dmso control
DMSO control
N.D.
N.D.
-0.4
-0.1
-0.5
carbon source
D-Raffinose (C)
N.D.
N.D.
-0.6
+0.1
-0.3
carbon source
D-Fructose (C)
N.D.
N.D.
-0.1
-0.0
-0.5
carbon source
pyruvate (C)
N.D.
N.D.
+0.1
-0.1
-0.5
carbon source
D-Tagatose (C)
N.D.
N.D.
+0.2
-0.0
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
N.D.
N.D.
-0.1
+0.2
-0.5
carbon source
Trisodium citrate (C)
N.D.
N.D.
+0.3
-0.1
-0.4
carbon source
L-Histidine (C)
N.D.
N.D.
-0.4
+0.1
+0.3
carbon source
D-Alanine (C)
N.D.
N.D.
-0.3
+0.2
+0.2
carbon source
Sucrose (C)
N.D.
N.D.
+0.5
-0.4
-0.0
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
-0.4
-0.1
+0.6
carbon source
D-Galactose (C)
N.D.
N.D.
-0.1
-0.2
+0.5
carbon source
D-Glucosamine Hydrochloride (C)
N.D.
N.D.
-0.3
+0.1
+0.3
carbon source
L-Proline (C)
N.D.
N.D.
-0.3
-0.2
+0.6
carbon source
D-Lactate (C)
N.D.
N.D.
+0.5
-0.1
-0.1
carbon source
Tween 20 (C)
N.D.
N.D.
+0.1
-0.1
+0.4
carbon source
L-Histidine (C)
N.D.
N.D.
+0.2
-0.3
+0.4
carbon source
NAG (C)
N.D.
N.D.
+0.2
-0.2
+0.3
carbon source
D-Mannitol (C)
N.D.
N.D.
-0.2
-0.0
+0.5
stress
R2A with 3-octanone 5.31033333333333 mM
N.D.
N.D.
-0.1
+0.2
+0.4
carbon source
D-Glucose-6-Phosphate (C)
N.D.
N.D.
+0.3
-0.1
+0.4
carbon source
D,L-Lactate (C)
N.D.
N.D.
+0.4
-0.1
+0.3
carbon source
L-Glutamic (C)
N.D.
N.D.
-0.0
+0.2
+0.4
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
N.D.
N.D.
-0.0
+0.3
+0.4
carbon source
2-Deoxy-D-Ribose (C)
N.D.
N.D.
+0.3
-0.0
+0.4
carbon source
D,L-Lactate (C)
N.D.
N.D.
-0.0
+0.0
+0.7
carbon source
Ying_all64 rep A; time point 1
N.D.
N.D.
+0.3
+0.2
+0.3
carbon source
a-Cyclodextrin (C)
N.D.
N.D.
-0.0
+0.4
+0.4
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
N.D.
N.D.
+0.3
+0.2
+0.3
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
N.D.
N.D.
+0.1
+0.3
+0.6
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