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Gene
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Cofit
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS18975 and ABIE41_RS18980 overlap by 33 nucleotides
ABIE41_RS18980 and ABIE41_RS18985 are separated by 440 nucleotides
ABIE41_RS18985 and ABIE41_RS18990 are separated by 161 nucleotides
ABIE41_RS18990 and ABIE41_RS18995 are separated by 104 nucleotides
ABIE41_RS18975: ABIE41_RS18975 - NAD(P)H-dependent oxidoreductase, at 3,906,540 to 3,907,307
_RS18975
ABIE41_RS18980: ABIE41_RS18980 - LysR family transcriptional regulator, at 3,907,275 to 3,908,147
_RS18980
ABIE41_RS18985: ABIE41_RS18985 - IS3 family transposase, at 3,908,588 to 3,909,727
_RS18985
ABIE41_RS18990: ABIE41_RS18990 - hypothetical protein, at 3,909,889 to 3,910,488
_RS18990
ABIE41_RS18995: ABIE41_RS18995 - LysR family transcriptional regulator, at 3,910,593 to 3,911,468
_RS18995
Group
Condition
ABIE41
_RS18975
ABIE41
_RS18980
ABIE41
_RS18985
ABIE41
_RS18990
ABIE41
_RS18995
carbon source
m-Inositol (C)
-0.0
-0.1
-0.3
-0.3
-0.7
carbon source
NAG (C)
-0.1
-0.9
+0.2
-0.2
-0.4
carbon source
D-Raffinose (C)
+0.0
-1.0
-0.1
-0.2
-0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.0
-0.5
-0.2
-0.1
-0.4
carbon source
D-Tagatose (C)
-0.2
-0.6
-0.0
-0.0
-0.3
carbon source
D,L-Lactate (C)
-0.2
-0.1
-0.1
-0.3
-0.3
carbon source
L-Malic (C)
+0.1
-0.5
-0.1
+0.0
-0.4
carbon source
Tween 20 (C)
-0.1
-0.2
-0.1
-0.1
-0.4
carbon source
succinate (C)
+0.0
-0.6
+0.1
-0.1
-0.4
stress
R2A with 3-octanone 5.3129 mM
-0.1
-0.1
-0.1
-0.3
-0.4
carbon source
NAG (C)
+0.0
-0.7
-0.2
+0.0
-0.2
carbon source
D-Xylose (C)
-0.1
-0.5
-0.1
-0.1
-0.1
carbon source
D-Xylose (C)
-0.2
-0.6
+0.2
-0.1
-0.0
carbon source
Ying_all64 rep A; time point 2
-0.2
-0.1
-0.1
+0.1
-0.4
carbon source
Trisodium citrate (C)
-0.3
+0.2
+0.3
-0.2
-0.8
carbon source
D-Glucose-6-Phosphate (C)
-0.0
+0.1
-0.1
+0.0
-0.6
carbon source
L-Arabinose (C)
+0.4
-0.2
-0.1
-0.3
-0.5
carbon source
D-Glucosamine Hydrochloride (C)
-0.1
-0.2
+0.2
-0.0
-0.4
carbon source
D-Ribose (C)
+0.1
-0.5
-0.2
-0.1
+0.2
carbon source
L-Fucose (C)
-0.1
-0.1
+0.2
-0.3
-0.2
stress
R2A with 3-octanone 5.31033333333333 mM
+0.2
-0.0
-0.2
-0.3
-0.2
carbon source
Fumarate (C)
-0.0
-0.4
+0.1
-0.2
+0.2
carbon source
D-Fructose (C)
-0.1
-0.7
+0.2
+0.2
+0.2
carbon source
a-Cyclodextrin (C)
-0.2
+0.1
+0.3
+0.0
-0.5
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.0
+0.2
+0.1
-0.2
-0.2
stress
R2A with 1-octen-3-ol 0.493390333333333 mM
+0.1
+0.3
-0.1
-0.2
-0.3
carbon source
D-Glucose-6-Phosphate (C)
-0.3
-0.1
+0.2
-0.1
+0.4
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
+0.4
-0.2
-0.1
-0.1
dmso control
DMSO control
+0.0
+0.4
-0.1
-0.2
+0.2
r2a no stress control
R2A no stress control
+0.0
+0.3
+0.2
-0.2
+0.2
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ABIE41_RS18985
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