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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS17820 and ABIE41_RS17825 are separated by 145 nucleotides
ABIE41_RS17825 and ABIE41_RS17830 are separated by 178 nucleotides
ABIE41_RS17830 and ABIE41_RS17835 are separated by 7 nucleotides
ABIE41_RS17835 and ABIE41_RS17840 overlap by 1 nucleotides
ABIE41_RS17820: ABIE41_RS17820 - ribosome biogenesis GTPase Der, at 3,671,227 to 3,672,648
_RS17820
ABIE41_RS17825: ABIE41_RS17825 - tetratricopeptide repeat protein, at 3,672,794 to 3,673,456
_RS17825
ABIE41_RS17830: ABIE41_RS17830 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 3,673,635 to 3,674,732
_RS17830
ABIE41_RS17835: ABIE41_RS17835 - peptidylprolyl isomerase, at 3,674,740 to 3,675,210
_RS17835
ABIE41_RS17840: ABIE41_RS17840 - hypothetical protein, at 3,675,210 to 3,675,878
_RS17840
Group
Condition
ABIE41
_RS17820
ABIE41
_RS17825
ABIE41
_RS17830
ABIE41
_RS17835
ABIE41
_RS17840
carbon source
D-Galactose (C)
N.D.
-0.8
+0.1
N.D.
-0.5
carbon source
L-Malic (C)
N.D.
-0.9
-0.1
N.D.
-0.3
carbon source
D-Tagatose (C)
N.D.
-0.0
-0.3
N.D.
-0.9
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.3
+0.0
N.D.
-0.7
carbon source
Ying_all64 rep A; time point 3
N.D.
-0.9
+0.1
N.D.
-0.1
stress
R2A with 3-octanone 5.31033333333333 mM
N.D.
-1.1
+0.0
N.D.
+0.3
carbon source
D-Alanine (C)
N.D.
+0.4
-0.1
N.D.
-1.0
dmso control
DMSO control
N.D.
-0.5
-0.4
N.D.
+0.1
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
N.D.
-1.0
+0.0
N.D.
+0.4
carbon source
Trisodium citrate (C)
N.D.
-0.3
+0.3
N.D.
-0.6
carbon source
L-Fucose (C)
N.D.
+0.4
-0.2
N.D.
-0.6
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.7
+0.4
N.D.
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.3133 mM
N.D.
-0.5
-0.3
N.D.
+0.5
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
-0.5
-0.3
N.D.
+0.5
carbon source
D-Raffinose (C)
N.D.
+0.3
-0.8
N.D.
+0.4
r2a no stress control
R2A no stress control
N.D.
-0.7
+0.1
N.D.
+0.4
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
N.D.
-0.3
-0.3
N.D.
+0.4
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
-0.5
-0.1
N.D.
+0.5
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.5
+0.1
N.D.
+0.3
stress
R2A with 3-octanone 2.65516666666667 mM
N.D.
+0.2
-0.7
N.D.
+0.4
dmso control
DMSO control
N.D.
-0.5
+0.0
N.D.
+0.5
carbon source
D-Lactate (C)
N.D.
+0.5
+0.3
N.D.
-0.6
carbon source
Fumarate (C)
N.D.
+0.7
+0.2
N.D.
-0.7
carbon source
D-Glucose-6-Phosphate (C)
N.D.
-0.4
+0.4
N.D.
+0.4
carbon source
Ying_AminoAcid20 rep C; time point 1
N.D.
-0.3
+0.3
N.D.
+0.4
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
+0.5
-0.5
N.D.
+0.7
carbon source
L-Histidine (C)
N.D.
+0.5
-0.1
N.D.
+0.5
carbon source
a-Cyclodextrin (C)
N.D.
+0.6
+0.2
N.D.
+0.2
carbon source
D-Glucose-6-Phosphate (C)
N.D.
+0.7
+0.1
N.D.
+0.3
carbon source
D-Galactose (C)
N.D.
+0.6
+0.1
N.D.
+0.5
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